DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FRHQLEDLR
Uniprot ID:
Q8IXT5
Source protein:
RNA-binding protein 12B
Source gene:
RBM12B
Class:
DEG_APCC_DBOX_1
Location:
527:535
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8728
ASA_SCORE:
96.4333
COIL:
0.4154
CONS_SCORE:
0.4945
DSS_SCORE:
0.4305
HELIX:
0.5443
FCONS_SCORE:
1.1734
RIG_SCORE:
0.7838
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R528I
TCGA-B5-A0JY
UCEC
TCGA
FRHQLEDLR
DEG_APCC_DBOX_1
0.8102
p.R528I
TCGA-B5-A1MR
UCEC
TCGA
FRHQLEDLR
DEG_APCC_DBOX_1
0.8102
p.R528I
DO43041
UCEC
ICGC
FRHQLEDLR
DEG_APCC_DBOX_1
0.8102
p.R528I
DO41758
UCEC
ICGC
FRHQLEDLR
DEG_APCC_DBOX_1
0.8102
p.D538H
TCGA-E1-5307
LGG
TCGA
FRHQLEDLR
DEG_APCC_DBOX_1
0.25
p.D538H
DO22359
LGG
ICGC
FRHQLEDLR
DEG_APCC_DBOX_1
0.25
p.R528K
DO229052
LICA
ICGC
FRHQLEDLR
DEG_APCC_DBOX_1
0.7237
p.R528S
DO222402
MELA
ICGC
FRHQLEDLR
DEG_APCC_DBOX_1
0.7427
p.D533E
SIDM00376
B-Lymphoblastic Leukemia
GDSC
FRHQLEDLR
DEG_APCC_DBOX_1
0.5647
p.D533E
ACH-000156
Leukemia
CCLE
FRHQLEDLR
DEG_APCC_DBOX_1
0.5647
p.D533E
MHH-CALL-4
haematopoietic_and_lymphoid_tissue
COSMIC
FRHQLEDLR
DEG_APCC_DBOX_1
0.5647
p.F527V
SIDM00282
Colorectal Carcinoma
GDSC
FRHQLEDLR
DEG_APCC_DBOX_1
0.5957
p.F527V
ACH-000998
Colon/Colorectal Cancer
CCLE
FRHQLEDLR
DEG_APCC_DBOX_1
0.5957
p.F527V
CW-2
large_intestine
COSMIC
FRHQLEDLR
DEG_APCC_DBOX_1
0.5957
Drug responses associated with RBM12B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FRHQLEDLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXT5
RNA-binding protein 12B
DEG_APCC_DBOX_1
527:535
FRHQLEDLR
APC,CDC20,FZR1
0.8728
More...