DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FRKHLRMVG
Uniprot ID:
Q6X4W1
Source protein:
NMDA receptor synaptonuclear signaling and neuronal migration factor
Source gene:
NSMF
Class:
DEG_APCC_DBOX_1
Location:
262:270
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5236
ASA_SCORE:
105.0889
COIL:
0.5107
CONS_SCORE:
0.4992
DSS_SCORE:
0.4451
HELIX:
0.4409
FCONS_SCORE:
1.0293
RIG_SCORE:
0.7687
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A276T
TCGA-D1-A103
UCEC
TCGA
FRKHLRMVG
DEG_APCC_DBOX_1
0.1667
p.Q277H
TCGA-EK-A2R8
CESC
TCGA
FRKHLRMVG
DEG_APCC_DBOX_1
0.1389
p.M258V
DO219018
BLCA
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.2222
p.I255N
DO222769
COCA
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.1389
p.C260Y
DO50835
LICA
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.2778
p.H256N
DO51776
STAD
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.1667
p.R266Q
DO38336
STAD
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.7329
p.V254I
DO41784
UCEC
ICGC
FRKHLRMVG
DEG_APCC_DBOX_1
0.1111
p.A255V
SIDM00118
Colorectal Carcinoma
GDSC
FRKHLRMVG
DEG_APCC_DBOX_1
0.1389
p.A255V
HCC2998
large_intestine
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.1389
p.A253V
ACH-001081
Colon/Colorectal Cancer
CCLE
FRKHLRMVG
DEG_APCC_DBOX_1
0.0833
p.A253V
HCC2998
large_intestine
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.0833
p.T270P
HCC-366
lung
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.7031
p.R266W
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.8634
p.T272P
HCC-366
lung
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.2778
p.R264W
SU-DHL-10
haematopoietic_and_lymphoid_tissue
COSMIC
FRKHLRMVG
DEG_APCC_DBOX_1
0.8634
Drug responses associated with NSMF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FRKHLRMVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6X4W1
NMDA receptor synaptonuclear signaling and neuronal migration factor
DEG_APCC_DBOX_1
262:270
FRKHLRMVG
APC,CDC20,FZR1
0.5236
More...