DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FSGGWRMRV
Uniprot ID:
Q8NE71
Source protein:
ATP-binding cassette sub-family F member 1
Source gene:
ABCF1
Class:
DEG_MDM2_SWIB_1
Location:
452:460
E3 ligase:
MDM2
DEGRON score:
0.7667
ASA_SCORE:
31.9556
COIL:
0.3033
CONS_SCORE:
0.7678
DSS_SCORE:
0.284
HELIX:
0.6878
FCONS_SCORE:
1.4105
RIG_SCORE:
0.7692
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S461F
TCGA-FS-A1YY
SKCM
TCGA
FSGGWRMRV
DEG_MDM2_SWIB_1
0.3056
p.S461F
DO37415
SKCM
ICGC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.3056
p.R459C
TCGA-HT-8564
LGG
TCGA
FSGGWRMRV
DEG_MDM2_SWIB_1
0.719
p.R459C
DO44623
LGG
ICGC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.719
p.R457C
TCGA-QQ-A8VF
SARC
TCGA
FSGGWRMRV
DEG_MDM2_SWIB_1
0.719
p.R457C
DO220258
SARC
ICGC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.719
p.G454R
SIDM00789
Colorectal Carcinoma
GDSC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.6457
p.G454R
ACH-000997
Colon/Colorectal Cancer
CCLE
FSGGWRMRV
DEG_MDM2_SWIB_1
0.6457
p.G454R
HCT-15
large_intestine
COSMIC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.6457
p.R457H
SIDM00451
T-Lymphoblastic Leukemia
GDSC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.7133
p.R457H
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.7133
p.G455D
SIDM01729
Endometrial Carcinoma
GDSC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.6087
p.G455D
ACH-000909
Endometrial/Uterine Cancer
CCLE
FSGGWRMRV
DEG_MDM2_SWIB_1
0.6087
p.R460Q
CW-2
large_intestine
COSMIC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.7329
p.D445N
COLO-792
skin
COSMIC
FSGGWRMRV
DEG_MDM2_SWIB_1
0.1389
Drug responses associated with ABCF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FSGGWRMRV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NE71
ATP-binding cassette sub-family F member 1
DEG_MDM2_SWIB_1
452:460
FSGGWRMRV
MDM2
0.7667
More...