DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
FSLHQD
Uniprot ID:
Q9Y644
Source protein:
Beta-1,3-N-acetylglucosaminyltransferase radical fringe
Source gene:
RFNG
Class:
LIG_APCC_ABBA_1
Location:
297:302
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9605
ASA_SCORE:
62.3333
COIL:
0.7882
CONS_SCORE:
0.5598
DSS_SCORE:
0.3154
HELIX:
0.072
FCONS_SCORE:
0.8413
RIG_SCORE:
0.7376
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L312F
TCGA-BA-5556
HNSC
TCGA
FSLHQD
LIG_APCC_ABBA_1
0.0556
p.A294V
TCGA-BR-7707
STAD
TCGA
FSLHQD
LIG_APCC_ABBA_1
0.25
p.R305L
TCGA-FS-A1ZZ
SKCM
TCGA
FSLHQD
LIG_APCC_ABBA_1
0.25
p.G296S
TCGA-VQ-A8P2
STAD
TCGA
FSLHQD
LIG_APCC_ABBA_1
0.3056
p.G296S
DO51761
STAD
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.3056
p.H288Q
DO230334
COCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO229010
COCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO229013
COCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO229016
COCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO229005
COCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO228947
LICA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO230529
LUSC
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.H288Q
DO52365
LUSC
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.0833
p.P303R
DO233273
GACA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.3056
p.H300Y
DO229218
THCA
ICGC
FSLHQD
LIG_APCC_ABBA_1
0.6118
p.S298N
SIDM01016
T-Lymphoblastic Leukemia
GDSC
FSLHQD
LIG_APCC_ABBA_1
0.5958
p.S298N
SIDM01263
T-Lymphoblastic Leukemia
GDSC
FSLHQD
LIG_APCC_ABBA_1
0.5958
p.S298N
ACH-000995
Leukemia
CCLE
FSLHQD
LIG_APCC_ABBA_1
0.5958
p.S298N
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
FSLHQD
LIG_APCC_ABBA_1
0.5958
p.V293M
SIDM00807
Bladder Carcinoma
GDSC
FSLHQD
LIG_APCC_ABBA_1
0.2222
p.V293M
ACH-000905
Bladder Cancer
CCLE
FSLHQD
LIG_APCC_ABBA_1
0.2222
p.V293M
5637
urinary_tract
COSMIC
FSLHQD
LIG_APCC_ABBA_1
0.2222
p.R305W
SIDM01525
Acute Myeloid Leukemia
GDSC
FSLHQD
LIG_APCC_ABBA_1
0.25
Drug responses associated with RFNG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FSLHQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y644
Beta-1,3-N-acetylglucosaminyltransferase radical fringe
LIG_APCC_ABBA_1
297:302
FSLHQD
APC,CDC20,FZR1
0.9605
More...