DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
FSSGWTVRL
Uniprot ID:
Q9UPN3
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
Source gene:
MACF1
Class:
DEG_MDM2_SWIB_1
Location:
2036:2044
E3 ligase:
MDM2
DEGRON score:
0.9716
ASA_SCORE:
73.4222
COIL:
0.5909
CONS_SCORE:
0.2259
DSS_SCORE:
0.3815
HELIX:
0.0468
FCONS_SCORE:
0.8025
RIG_SCORE:
0.7576
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2032I
TCGA-05-4410
LUAD
TCGA
FSSGWTVRL
DEG_MDM2_SWIB_1
0.2222
p.S2047Y
TCGA-AP-A1E0
UCEC
TCGA
FSSGWTVRL
DEG_MDM2_SWIB_1
0.25
p.L2029F
TCGA-EE-A3JI
SKCM
TCGA
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1389
p.L2029F
SIDM00578
Neuroblastoma
GDSC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1389
p.L2029F
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1389
p.L2029F
SIDM01781
Gastric Carcinoma
GDSC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1389
p.L2029F
NB1
autonomic_ganglia
COSMIC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1389
p.L2033M
TCGA-IB-7651
PAAD
TCGA
FSSGWTVRL
DEG_MDM2_SWIB_1
0.25
p.V2030A
ACH-000999
Colon/Colorectal Cancer
CCLE
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1667
p.V2030A
SNU-1040
large_intestine
COSMIC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1667
p.G2033D
CW-2
large_intestine
COSMIC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.25
p.T2030A
COLO-684
endometrium
COSMIC
FSSGWTVRL
DEG_MDM2_SWIB_1
0.1667
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FSSGWTVRL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPN3
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
DEG_MDM2_SWIB_1
2036:2044
FSSGWTVRL
MDM2
0.9716
More...