DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
FSVAWTAL
Uniprot ID:
Q9UFC0
Source protein:
Leucine-rich repeat and WD repeat-containing protein 1
Source gene:
LRWD1
Class:
DEG_MDM2_SWIB_1
Location:
343:350
E3 ligase:
MDM2
DEGRON score:
0.5467
ASA_SCORE:
19.5625
COIL:
0.1739
CONS_SCORE:
0.7895
DSS_SCORE:
0.0421
HELIX:
0.0419
FCONS_SCORE:
1.2466
RIG_SCORE:
0.9705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P338L
TCGA-GN-A265
SKCM
TCGA
FSVAWTAL
DEG_MDM2_SWIB_1
0.1944
p.P338L
DO37491
SKCM
ICGC
FSVAWTAL
DEG_MDM2_SWIB_1
0.1944
p.Q355H
DO233260
GACA
ICGC
FSVAWTAL
DEG_MDM2_SWIB_1
0.1944
p.A349T
DO233737
GACA
ICGC
FSVAWTAL
DEG_MDM2_SWIB_1
0.6028
p.V345L
DO228936
LICA
ICGC
FSVAWTAL
DEG_MDM2_SWIB_1
0.5654
p.E340K
ACH-000972
Endometrial/Uterine Cancer
CCLE
FSVAWTAL
DEG_MDM2_SWIB_1
0.25
p.A349V
ACH-002446
Gastric Cancer
CCLE
FSVAWTAL
DEG_MDM2_SWIB_1
0.5825
Drug responses associated with LRWD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of FSVAWTAL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UFC0
Leucine-rich repeat and WD repeat-containing protein 1
DEG_MDM2_SWIB_1
343:350
FSVAWTAL
MDM2
0.5467
More...