DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GNEPTPTK
Uniprot ID:
O75969
Source protein:
A-kinase anchor protein 3
Source gene:
AKAP3
Class:
DEG_SCF_SKP2-CKS1_1
Location:
162:169
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8594
ASA_SCORE:
86.375
COIL:
0.8255
CONS_SCORE:
0.8397
DSS_SCORE:
0.3754
HELIX:
0.1386
FCONS_SCORE:
0.9263
RIG_SCORE:
0.7019
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T168P
TCGA-06-5416
GBM
TCGA
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.5919
p.T168P
DO10880
GBM
ICGC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.5919
p.K169T
TCGA-AG-A002
READ
TCGA
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.7306
p.L159S
TCGA-BS-A0UJ
UCEC
TCGA
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.25
p.L159S
DO42745
UCEC
ICGC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.25
p.K153N
TCGA-EE-A3J5
SKCM
TCGA
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.K153N
DO47331
SKCM
ICGC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.N152K
TCGA-GN-A269
SKCM
TCGA
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.0556
p.N152K
DO37483
SKCM
ICGC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E164V
DO34656
PACA
ICGC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.7693
p.Q157R
SIDM00215
Colorectal Carcinoma
GDSC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.Q157R
ACH-000708
Colon/Colorectal Cancer
CCLE
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.Q157R
SNU-283
large_intestine
COSMIC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.L178P
SIDM00889
Cervical Carcinoma
GDSC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.0833
p.L178P
ACH-001333
Cervical Cancer
CCLE
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.0833
p.L178P
C-33-A
cervix
COSMIC
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.0833
p.I174L
ACH-000793
Gastric Cancer
CCLE
GNEPTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
Drug responses associated with AKAP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GNEPTPTK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75969
A-kinase anchor protein 3
DEG_SCF_SKP2-CKS1_1
162:169
GNEPTPTK
SKP2,CSK1
0.8594
More...