DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GPGAAVEPN
Uniprot ID:
Q5QJ38
Source protein:
Trichohyalin-like protein 1
Source gene:
TCHHL1
Class:
DEG_SIAH_1
Location:
642:650
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9699
ASA_SCORE:
91.8333
COIL:
0.9548
CONS_SCORE:
0.7411
DSS_SCORE:
0.8798
HELIX:
0.0249
FCONS_SCORE:
1.1389
RIG_SCORE:
0.5224
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P649H
TCGA-33-4566
LUSC
TCGA
GPGAAVEPN
DEG_SIAH_1
0.7694
p.P649H
DO26790
LUSC
ICGC
GPGAAVEPN
DEG_SIAH_1
0.7694
p.G637V
TCGA-80-5608
LUAD
TCGA
GPGAAVEPN
DEG_SIAH_1
0.1944
p.G637V
DO23693
LUAD
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1944
p.P638T
TCGA-AP-A051
UCEC
TCGA
GPGAAVEPN
DEG_SIAH_1
0.2222
p.P638T
DO42673
UCEC
ICGC
GPGAAVEPN
DEG_SIAH_1
0.2222
p.G637D
TCGA-AX-A0J1
UCEC
TCGA
GPGAAVEPN
DEG_SIAH_1
0.1944
p.G637D
DO41199
UCEC
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1944
p.E632K
TCGA-BF-AAP1
SKCM
TCGA
GPGAAVEPN
DEG_SIAH_1
0.0556
p.E632K
DO219464
SKCM
ICGC
GPGAAVEPN
DEG_SIAH_1
0.0556
p.N650S
TCGA-D1-A167
UCEC
TCGA
GPGAAVEPN
DEG_SIAH_1
0.5958
p.N650S
DO40978
UCEC
ICGC
GPGAAVEPN
DEG_SIAH_1
0.5958
p.G639E
TCGA-D3-A51R
SKCM
TCGA
GPGAAVEPN
DEG_SIAH_1
0.25
p.G639E
DO47480
SKCM
ICGC
GPGAAVEPN
DEG_SIAH_1
0.25
p.G637S
TCGA-EE-A3AA
SKCM
TCGA
GPGAAVEPN
DEG_SIAH_1
0.1944
p.G637S
DO222632
MELA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1944
p.G637S
DO37571
SKCM
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1944
p.G651V
DO222404
BTCA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.3056
p.H633N
DO228952
LICA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.0833
p.E632G
DO229062
LICA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.0556
p.A660S
DO220906
MELA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.0556
p.S658F
DO222653
MELA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1111
p.E657K
DO222843
MELA
ICGC
GPGAAVEPN
DEG_SIAH_1
0.1389
p.T659R
SIDM00294
Small Cell Lung Carcinoma
GDSC
GPGAAVEPN
DEG_SIAH_1
0.0833
p.T659R
ACH-001549
Lung Cancer
CCLE
GPGAAVEPN
DEG_SIAH_1
0.0833
p.T659R
LU-135
lung
COSMIC
GPGAAVEPN
DEG_SIAH_1
0.0833
p.G642D
SIDM00003
Melanoma
GDSC
GPGAAVEPN
DEG_SIAH_1
0.6087
p.G642D
ACH-002159
Skin Cancer
CCLE
GPGAAVEPN
DEG_SIAH_1
0.6087
p.G642D
M14
skin
COSMIC
GPGAAVEPN
DEG_SIAH_1
0.6087
p.A645G
SIDM00247
Gastric Carcinoma
GDSC
GPGAAVEPN
DEG_SIAH_1
0.754
p.A645G
ACH-000356
Gastric Cancer
CCLE
GPGAAVEPN
DEG_SIAH_1
0.754
p.A645G
MKN45
stomach
COSMIC
GPGAAVEPN
DEG_SIAH_1
0.754
p.P653L
SIDM00451
T-Lymphoblastic Leukemia
GDSC
GPGAAVEPN
DEG_SIAH_1
0.25
p.P653L
ACH-000937
Leukemia
CCLE
GPGAAVEPN
DEG_SIAH_1
0.25
p.P653L
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
GPGAAVEPN
DEG_SIAH_1
0.25
Drug responses associated with TCHHL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GPGAAVEPN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5QJ38
Trichohyalin-like protein 1
DEG_SIAH_1
642:650
GPGAAVEPN
SIAH1,SIAH2,SIAH3
0.9699
More...