DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GPSAPVPPM
Uniprot ID:
O14497
Source protein:
AT-rich interactive domain-containing protein 1A
Source gene:
ARID1A
Class:
DEG_SIAH_1
Location:
1556:1564
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.921
ASA_SCORE:
93.5889
COIL:
0.9781
CONS_SCORE:
0.5065
DSS_SCORE:
0.7648
HELIX:
0.0103
FCONS_SCORE:
1.1792
RIG_SCORE:
0.5078
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1563T
TCGA-66-2727
LUSC
TCGA
GPSAPVPPM
DEG_SIAH_1
0.7031
p.P1563T
DO26478
LUSC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.7031
p.G1549D
TCGA-AP-A0LM
UCEC
TCGA
GPSAPVPPM
DEG_SIAH_1
0.1389
p.G1549D
DO43306
UCEC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.1389
p.R1566S
TCGA-AP-A1E1
UCEC
TCGA
GPSAPVPPM
DEG_SIAH_1
0.2778
p.R1566S
DO43226
UCEC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.2778
p.G1549V
TCGA-BR-4184
STAD
TCGA
GPSAPVPPM
DEG_SIAH_1
0.1389
p.G1549V
DO38328
STAD
ICGC
GPSAPVPPM
DEG_SIAH_1
0.1389
p.R1551H
TCGA-KK-A59V
PRAD
TCGA
GPSAPVPPM
DEG_SIAH_1
0.1944
p.R1551H
TCGA-PG-A917
UCEC
TCGA
GPSAPVPPM
DEG_SIAH_1
0.1944
p.R1551H
DO51346
PRAD
ICGC
GPSAPVPPM
DEG_SIAH_1
0.1944
p.R1551H
DO52424
UCEC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.1944
p.P1553S
DO229004
LICA
ICGC
GPSAPVPPM
DEG_SIAH_1
0.25
p.V1561L
DO23164
LINC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.6765
p.P1562L
DO220851
MELA
ICGC
GPSAPVPPM
DEG_SIAH_1
0.6471
p.P1553L
DO228017
SKCA
ICGC
GPSAPVPPM
DEG_SIAH_1
0.25
p.E1560D
DO41758
UCEC
ICGC
GPSAPVPPM
DEG_SIAH_1
0.6758
p.E1548K
ACH-001402
Cervical Cancer
CCLE
GPSAPVPPM
DEG_SIAH_1
0.1111
p.E1548K
SW756
cervix
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.1111
p.S1574P
ACH-002183
Ovarian Cancer
CCLE
GPSAPVPPM
DEG_SIAH_1
0.0556
p.S1574P
OVMIU
ovary
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.0556
p.V1565F
ACH-002267
Leukemia
CCLE
GPSAPVPPM
DEG_SIAH_1
0.3056
p.V1565F
LC4-1
haematopoietic_and_lymphoid_tissue
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.3056
p.P1556L
MIA-PaCa-2
pancreas
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.7582
p.D1573E
NCI-H810
lung
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.0833
p.D1574E
NCI-H810
lung
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.0556
p.P1557L
MIA-PaCa-2
pancreas
COSMIC
GPSAPVPPM
DEG_SIAH_1
0.7582
Drug responses associated with ARID1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GPSAPVPPM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14497
AT-rich interactive domain-containing protein 1A
DEG_SIAH_1
1556:1564
GPSAPVPPM
SIAH1,SIAH2,SIAH3
0.921
More...