DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GPYAEVKPL
Uniprot ID:
Q8NEY1
Source protein:
Neuron navigator 1
Source gene:
NAV1
Class:
DEG_SIAH_1
Location:
177:185
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9032
ASA_SCORE:
88.1111
COIL:
0.7847
CONS_SCORE:
0.4635
DSS_SCORE:
0.5655
HELIX:
0.0797
FCONS_SCORE:
0.9807
RIG_SCORE:
0.6799
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K170N
TCGA-B6-A0I8
BRCA
TCGA
GPYAEVKPL
DEG_SIAH_1
0.25
p.K170N
DO2149
BRCA
ICGC
GPYAEVKPL
DEG_SIAH_1
0.25
p.P184L
TCGA-BR-8487
STAD
TCGA
GPYAEVKPL
DEG_SIAH_1
0.7582
p.P184L
DO47867
STAD
ICGC
GPYAEVKPL
DEG_SIAH_1
0.7582
p.P171L
TCGA-L5-A8NR
ESCA
TCGA
GPYAEVKPL
DEG_SIAH_1
0.1667
p.R173Q
DO233210
GACA
ICGC
GPYAEVKPL
DEG_SIAH_1
0.2222
p.P178S
DO38404
STAD
ICGC
GPYAEVKPL
DEG_SIAH_1
0.6752
p.A180V
SIDM00837
Colorectal Carcinoma
GDSC
GPYAEVKPL
DEG_SIAH_1
0.6936
p.A180V
SW48
large_intestine
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.6936
p.E195K
SIDM01066
Melanoma
GDSC
GPYAEVKPL
DEG_SIAH_1
0.0556
p.E195K
IGR-37
skin
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.0556
p.P184S
SIDM00438
B-Lymphoblastic Leukemia
GDSC
GPYAEVKPL
DEG_SIAH_1
0.6752
p.P184S
MN-60
haematopoietic_and_lymphoid_tissue
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.6752
p.V193M
SIDM01617
Endometrial Carcinoma
GDSC
GPYAEVKPL
DEG_SIAH_1
0.1111
p.P176L
ACH-000098
Brain Cancer
CCLE
GPYAEVKPL
DEG_SIAH_1
0.3056
p.P176L
GAMG
central_nervous_system
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.3056
p.A193V
ACH-000958
Colon/Colorectal Cancer
CCLE
GPYAEVKPL
DEG_SIAH_1
0.1111
p.A193V
SW48
large_intestine
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.1111
p.A170T
NU-DUL-1
haematopoietic_and_lymphoid_tissue
COSMIC
GPYAEVKPL
DEG_SIAH_1
0.25
Drug responses associated with NAV1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GPYAEVKPL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEY1
Neuron navigator 1
DEG_SIAH_1
177:185
GPYAEVKPL
SIAH1,SIAH2,SIAH3
0.9032
More...