DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRAELHPVE
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
DEG_APCC_DBOX_1
Location:
2046:2054
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9901
ASA_SCORE:
98.4556
COIL:
0.8571
CONS_SCORE:
0.5888
DSS_SCORE:
0.4875
HELIX:
0.0929
FCONS_SCORE:
1.0039
RIG_SCORE:
0.7071
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2045F
TCGA-CN-6010
HNSC
TCGA
GRAELHPVE
DEG_APCC_DBOX_1
0.3056
p.L2045F
DO14766
HNSC
ICGC
GRAELHPVE
DEG_APCC_DBOX_1
0.3056
p.F2041L
TCGA-N9-A4Q7
UCS
TCGA
GRAELHPVE
DEG_APCC_DBOX_1
0.1944
p.R2047L
DO228288
LICA
ICGC
GRAELHPVE
DEG_APCC_DBOX_1
0.8428
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRAELHPVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_APCC_DBOX_1
2046:2054
GRAELHPVE
APC,CDC20,FZR1
0.9901
More...