DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRANLQNLL
Uniprot ID:
Q3C1V0
Source protein:
Membrane-spanning 4-domains subfamily A member 18
Source gene:
MS4A18
Class:
DEG_APCC_DBOX_1
Location:
55:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7851
ASA_SCORE:
81.6
COIL:
0.7758
CONS_SCORE:
0.7176
DSS_SCORE:
0.273
HELIX:
0.0988
FCONS_SCORE:
1.3296
RIG_SCORE:
0.8243
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N58S
DO227709
COCA
ICGC
GRANLQNLL
DEG_APCC_DBOX_1
0.5958
p.V64M
DO229480
LAML
ICGC
GRANLQNLL
DEG_APCC_DBOX_1
0.3056
p.V64M
DO231072
LUSC
ICGC
GRANLQNLL
DEG_APCC_DBOX_1
0.3056
p.V65L
DO27334
LUSC
ICGC
GRANLQNLL
DEG_APCC_DBOX_1
0.2778
p.G72D
ACH-000779
Lung Cancer
CCLE
GRANLQNLL
DEG_APCC_DBOX_1
0.0833
p.I45V
ACH-001804
Liposarcoma
CCLE
GRANLQNLL
DEG_APCC_DBOX_1
0.0556
p.R56G
ACH-001959
Bile Duct Cancer
CCLE
GRANLQNLL
DEG_APCC_DBOX_1
0.7568
Drug responses associated with MS4A18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRANLQNLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3C1V0
Membrane-spanning 4-domains subfamily A member 18
DEG_APCC_DBOX_1
55:63
GRANLQNLL
APC,CDC20,FZR1
0.7851
More...