DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRAPLRDMF
Uniprot ID:
Q495M9
Source protein:
Usher syndrome type-1G protein
Source gene:
USH1G
Class:
DEG_APCC_DBOX_1
Location:
268:276
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5531
ASA_SCORE:
60.0111
COIL:
0.5129
CONS_SCORE:
0.6588
DSS_SCORE:
0.4059
HELIX:
0.3783
FCONS_SCORE:
1.0602
RIG_SCORE:
0.7948
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A286V
TCGA-06-0152
GBM
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.0556
p.A286V
DO11238
GBM
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0556
p.F276L
TCGA-AA-3984
COAD
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.587
p.F276L
DO9002
COAD
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.587
p.E280K
TCGA-B5-A0JY
UCEC
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.2222
p.E280K
DO43041
UCEC
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.2222
p.A262T
TCGA-B5-A11L
UCEC
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.1667
p.A262T
DO42961
UCEC
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.1667
p.R273L
TCGA-BF-A1Q0
SKCM
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.7316
p.R273L
DO47374
SKCM
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.7316
p.R285S
TCGA-DF-A2KN
UCEC
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.R285S
DO223282
UCEC
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.N263I
TCGA-EE-A2GR
SKCM
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.1944
p.N263I
DO37996
SKCM
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.1944
p.L277F
TCGA-EE-A2M8
SKCM
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.3056
p.L277F
DO38075
SKCM
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.3056
p.T260A
TCGA-FS-A1ZT
SKCM
TCGA
GRAPLRDMF
DEG_APCC_DBOX_1
0.1111
p.T260A
DO37468
SKCM
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.1111
p.Y261N
DO228848
LICA
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.1389
p.W267R
DO52664
MALY
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.3056
p.G259S
DO222837
MELA
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.G259S
SIDM00422
Hodgkin's Lymphoma
GDSC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.G259S
ACH-001203
Lymphoma
CCLE
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.G259S
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.D274E
DO46542
OV
ICGC
GRAPLRDMF
DEG_APCC_DBOX_1
0.5647
p.R273W
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
GRAPLRDMF
DEG_APCC_DBOX_1
0.7523
p.R273W
SIDM01680
Non-Cancerous
GDSC
GRAPLRDMF
DEG_APCC_DBOX_1
0.7523
p.R273W
ACH-000589
Lung Cancer
CCLE
GRAPLRDMF
DEG_APCC_DBOX_1
0.7523
p.R273W
ACH-002364
Non-Cancerous
CCLE
GRAPLRDMF
DEG_APCC_DBOX_1
0.7523
p.G259C
SIDM00814
Other Solid Cancers
GDSC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.G259C
ACH-001401
Adrenal Cancer
CCLE
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.G259C
SW13
adrenal_gland
COSMIC
GRAPLRDMF
DEG_APCC_DBOX_1
0.0833
p.P271S
ACH-001982
Metastasis
CCLE
GRAPLRDMF
DEG_APCC_DBOX_1
0.5641
Drug responses associated with USH1G mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRAPLRDMF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q495M9
Usher syndrome type-1G protein
DEG_APCC_DBOX_1
268:276
GRAPLRDMF
APC,CDC20,FZR1
0.5531
More...