DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRATLLPMP
Uniprot ID:
Q8IV32
Source protein:
Coiled-coil domain-containing protein 71
Source gene:
CCDC71
Class:
DEG_APCC_DBOX_1
Location:
112:120
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8201
ASA_SCORE:
82.5667
COIL:
0.7373
CONS_SCORE:
0.5289
DSS_SCORE:
0.5067
HELIX:
0.2168
FCONS_SCORE:
0.9298
RIG_SCORE:
0.7284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R104L
TCGA-86-7701
LUAD
TCGA
GRATLLPMP
DEG_APCC_DBOX_1
0.1111
p.R104L
DO24441
LUAD
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.1111
p.A126V
TCGA-AP-A051
UCEC
TCGA
GRATLLPMP
DEG_APCC_DBOX_1
0.1667
p.A126V
DO42673
UCEC
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.1667
p.T115S
TCGA-BT-A3PJ
BLCA
TCGA
GRATLLPMP
DEG_APCC_DBOX_1
0.7116
p.T115S
DO44097
BLCA
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.7116
p.R124K
TCGA-D5-6927
COAD
TCGA
GRATLLPMP
DEG_APCC_DBOX_1
0.2222
p.R124K
DO10332
COAD
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.2222
p.R108Q
TCGA-HU-A4G3
STAD
TCGA
GRATLLPMP
DEG_APCC_DBOX_1
0.2222
p.R108Q
DO47807
STAD
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.2222
p.M119T
DO48414
BLCA
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.7423
p.A106D
DO229037
LICA
ICGC
GRATLLPMP
DEG_APCC_DBOX_1
0.1667
p.M107V
SIDM00421
T-Cell Non-Hodgkin's Lymphoma
GDSC
GRATLLPMP
DEG_APCC_DBOX_1
0.1944
p.M107V
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
GRATLLPMP
DEG_APCC_DBOX_1
0.1944
Drug responses associated with CCDC71 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRATLLPMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IV32
Coiled-coil domain-containing protein 71
DEG_APCC_DBOX_1
112:120
GRATLLPMP
APC,CDC20,FZR1
0.8201
More...