DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRCMLTLLG
Uniprot ID:
O43736
Source protein:
Integral membrane protein 2A
Source gene:
ITM2A
Class:
DEG_APCC_DBOX_1
Location:
51:59
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6653
ASA_SCORE:
46.2444
COIL:
0.1
CONS_SCORE:
0.5857
DSS_SCORE:
0.0494
HELIX:
0.8496
FCONS_SCORE:
1.3369
RIG_SCORE:
0.9082
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L60P
TCGA-A5-A0G1
UCEC
TCGA
GRCMLTLLG
DEG_APCC_DBOX_1
0.3056
p.L60P
DO42472
UCEC
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.3056
p.Q44H
TCGA-DA-A1I1
SKCM
TCGA
GRCMLTLLG
DEG_APCC_DBOX_1
0.1389
p.Q44H
DO37966
SKCM
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.1389
p.E47V
TCGA-E9-A1R4
BRCA
TCGA
GRCMLTLLG
DEG_APCC_DBOX_1
0.2222
p.E47V
DO5815
BRCA
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.2222
p.G48V
TCGA-EO-A22X
UCEC
TCGA
GRCMLTLLG
DEG_APCC_DBOX_1
0.25
p.G48V
DO43907
UCEC
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.25
p.E45K
TCGA-GF-A6C9
SKCM
TCGA
GRCMLTLLG
DEG_APCC_DBOX_1
0.1667
p.E45K
DO51254
SKCM
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.1667
p.L64M
DO228916
LICA
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.1944
p.Q44K
DO229034
LICA
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.1389
p.K46Q
DO220855
MELA
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.3056
p.Q44R
DO229257
THCA
ICGC
GRCMLTLLG
DEG_APCC_DBOX_1
0.1389
p.G51V
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
GRCMLTLLG
DEG_APCC_DBOX_1
0.6421
p.G51V
ACH-000589
Lung Cancer
CCLE
GRCMLTLLG
DEG_APCC_DBOX_1
0.6421
p.G51V
NCI-H1437
lung
COSMIC
GRCMLTLLG
DEG_APCC_DBOX_1
0.6421
p.S50F
ACH-000923
Lymphoma
CCLE
GRCMLTLLG
DEG_APCC_DBOX_1
0.3056
Drug responses associated with ITM2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRCMLTLLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43736
Integral membrane protein 2A
DEG_APCC_DBOX_1
51:59
GRCMLTLLG
APC,CDC20,FZR1
0.6653
More...