DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRDGLPGLR
Uniprot ID:
Q02388
Source protein:
Collagen alpha-1
Source gene:
COL7A1
Class:
DEG_APCC_DBOX_1
Location:
1806:1814
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9647
ASA_SCORE:
78.5
COIL:
0.9181
CONS_SCORE:
0.5235
DSS_SCORE:
0.8413
HELIX:
0.0147
FCONS_SCORE:
0.9936
RIG_SCORE:
0.5784
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1823Y
TCGA-46-3765
LUSC
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.0833
p.S1823Y
DO26959
LUSC
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.0833
p.N1796T
TCGA-49-AARN
LUAD
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.0556
p.N1796T
DO218923
LUAD
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.0556
p.L1813F
TCGA-49-AARO
LUAD
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.6981
p.L1813F
DO218924
LUAD
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.6981
p.G1812C
TCGA-AX-A06F
UCEC
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.6489
p.G1812C
DO41752
UCEC
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.6489
p.G1821D
TCGA-BR-6452
STAD
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.1389
p.G1821D
DO38404
STAD
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.1389
p.G1821D
DO42673
UCEC
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.1389
p.R1814H
TCGA-CM-6162
COAD
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
TCGA-VQ-A8PO
STAD
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
DO8479
COAD
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
DO51773
STAD
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
SIDM00577
Neuroblastoma
GDSC
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
ACH-001603
Neuroblastoma
CCLE
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1814H
NH-12
autonomic_ganglia
COSMIC
GRDGLPGLR
DEG_APCC_DBOX_1
0.7133
p.R1807I
TCGA-E6-A1LX
UCEC
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.8102
p.R1807I
DO41020
UCEC
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.8102
p.R1814C
TCGA-EE-A2GO
SKCM
TCGA
GRDGLPGLR
DEG_APCC_DBOX_1
0.719
p.R1814C
DO37823
SKCM
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.719
p.R1814L
DO48388
BLCA
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.7316
p.A1799S
DO233265
GACA
ICGC
GRDGLPGLR
DEG_APCC_DBOX_1
0.1389
p.L1813I
SIDM01278
Colorectal Carcinoma
GDSC
GRDGLPGLR
DEG_APCC_DBOX_1
0.6063
p.P1811L
SIDM00980
Gastric Carcinoma
GDSC
GRDGLPGLR
DEG_APCC_DBOX_1
0.6471
p.P1811L
ACH-000948
Gastric Cancer
CCLE
GRDGLPGLR
DEG_APCC_DBOX_1
0.6471
p.P1811L
23132-87
stomach
COSMIC
GRDGLPGLR
DEG_APCC_DBOX_1
0.6471
Drug responses associated with COL7A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRDGLPGLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02388
Collagen alpha-1
DEG_APCC_DBOX_1
1806:1814
GRDGLPGLR
APC,CDC20,FZR1
0.9647
More...