DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GREHLRELP
Uniprot ID:
Q969G9
Source protein:
Protein naked cuticle homolog 1
Source gene:
NKD1
Class:
DEG_APCC_DBOX_1
Location:
428:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8314
ASA_SCORE:
81.4889
COIL:
0.639
CONS_SCORE:
0.4588
DSS_SCORE:
0.415
HELIX:
0.3069
FCONS_SCORE:
1.3001
RIG_SCORE:
0.7534
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V439L
TCGA-17-Z050
LUAD
TCGA
GREHLRELP
DEG_APCC_DBOX_1
0.25
p.A437T
TCGA-85-8048
LUSC
TCGA
GREHLRELP
DEG_APCC_DBOX_1
0.3056
p.A437T
DO27389
LUSC
ICGC
GREHLRELP
DEG_APCC_DBOX_1
0.3056
p.A437T
SIDM00602
Gastric Carcinoma
GDSC
GREHLRELP
DEG_APCC_DBOX_1
0.3056
p.A437T
ACH-000919
Gastric Cancer
CCLE
GREHLRELP
DEG_APCC_DBOX_1
0.3056
p.R429W
TCGA-ND-A4WC
UCS
TCGA
GREHLRELP
DEG_APCC_DBOX_1
0.8634
p.A418T
DO233088
GACA
ICGC
GREHLRELP
DEG_APCC_DBOX_1
0.0556
p.R429Q
DO233732
GACA
ICGC
GREHLRELP
DEG_APCC_DBOX_1
0.7329
p.E442G
ACH-000982
Colon/Colorectal Cancer
CCLE
GREHLRELP
DEG_APCC_DBOX_1
0.1667
p.S443N
ACH-001982
Metastasis
CCLE
GREHLRELP
DEG_APCC_DBOX_1
0.1389
Drug responses associated with NKD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GREHLRELP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969G9
Protein naked cuticle homolog 1
DEG_APCC_DBOX_1
428:436
GREHLRELP
APC,CDC20,FZR1
0.8314
More...