DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRFLLPGLE
Uniprot ID:
Q96C12
Source protein:
Armadillo repeat-containing protein 5
Source gene:
ARMC5
Class:
DEG_APCC_DBOX_1
Location:
840:848
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5885
ASA_SCORE:
34.4333
COIL:
0.3683
CONS_SCORE:
0.5873
DSS_SCORE:
0.4357
HELIX:
0.6277
FCONS_SCORE:
1.4604
RIG_SCORE:
0.7646
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R857H
TCGA-A5-A0G1
UCEC
TCGA
GRFLLPGLE
DEG_APCC_DBOX_1
0.0833
p.F842L
TCGA-D8-A1J8
BRCA
TCGA
GRFLLPGLE
DEG_APCC_DBOX_1
0.587
p.I858F
TCGA-UB-A7MB
LIHC
TCGA
GRFLLPGLE
DEG_APCC_DBOX_1
0.0556
p.L855H
SIDM00189
Melanoma
GDSC
GRFLLPGLE
DEG_APCC_DBOX_1
0.1389
p.L855H
CP67-MEL
skin
COSMIC
GRFLLPGLE
DEG_APCC_DBOX_1
0.1389
p.G840R
ACH-000935
Colon/Colorectal Cancer
CCLE
GRFLLPGLE
DEG_APCC_DBOX_1
0.6457
Drug responses associated with ARMC5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRFLLPGLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96C12
Armadillo repeat-containing protein 5
DEG_APCC_DBOX_1
840:848
GRFLLPGLE
APC,CDC20,FZR1
0.5885
More...