DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRFNLFKVQ
Uniprot ID:
Q6UN15
Source protein:
Pre-mRNA 3'-end-processing factor FIP1
Source gene:
FIP1L1
Class:
DEG_APCC_DBOX_1
Location:
229:237
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8652
ASA_SCORE:
87.1111
COIL:
0.6022
CONS_SCORE:
0.3348
DSS_SCORE:
0.5185
HELIX:
0.2758
FCONS_SCORE:
1.2157
RIG_SCORE:
0.8177
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G242A
TCGA-04-1331
OV
TCGA
GRFNLFKVQ
DEG_APCC_DBOX_1
0.1944
p.G242A
DO28119
OV
ICGC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.1944
p.R240I
TCGA-06-5416
GBM
TCGA
GRFNLFKVQ
DEG_APCC_DBOX_1
0.25
p.R240I
DO10880
GBM
ICGC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.25
p.S244L
TCGA-4E-A92E
UCEC
TCGA
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5833
p.S244L
DO223277
UCEC
ICGC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5833
p.G229V
DO229038
LICA
ICGC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.6421
p.N232S
SIDM00491
Thyroid Gland Carcinoma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM00465
Ovarian Carcinoma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM01172
Acute Myeloid Leukemia
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM00237
Non-Small Cell Lung Carcinoma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM00306
Non-Small Cell Lung Carcinoma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.N232S
SIDM01460
Glioma
GDSC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.5958
p.T228P
ESS-1
endometrium
COSMIC
GRFNLFKVQ
DEG_APCC_DBOX_1
0.3056
Drug responses associated with FIP1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRFNLFKVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UN15
Pre-mRNA 3'-end-processing factor FIP1
DEG_APCC_DBOX_1
229:237
GRFNLFKVQ
APC,CDC20,FZR1
0.8652
More...