DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRGGLGLVS
Uniprot ID:
P40425
Source protein:
Pre-B-cell leukemia transcription factor 2
Source gene:
PBX2
Class:
DEG_APCC_DBOX_1
Location:
14:22
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8936
ASA_SCORE:
61.4222
COIL:
0.7978
CONS_SCORE:
0.3682
DSS_SCORE:
0.8312
HELIX:
0.0489
FCONS_SCORE:
0.9701
RIG_SCORE:
0.5504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G14A
TCGA-BJ-A0Z2
THCA
TCGA
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
DO229234
THCA
ICGC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
DO39306
THCA
ICGC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
MM1S
haematopoietic_and_lymphoid_tissue
COSMIC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
NCI-H1437
lung
COSMIC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
DU-145
prostate
COSMIC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G14A
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G19A
TCGA-CN-A63U
HNSC
TCGA
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.G19A
DO44454
HNSC
ICGC
GRGGLGLVS
DEG_APCC_DBOX_1
0.6429
p.E24G
DO229479
SKCA
ICGC
GRGGLGLVS
DEG_APCC_DBOX_1
0.2778
p.L18Q
SIDM01573
Plasma Cell Myeloma
GDSC
GRGGLGLVS
DEG_APCC_DBOX_1
0.7765
p.L18Q
ACH-000576
Myeloma
CCLE
GRGGLGLVS
DEG_APCC_DBOX_1
0.7765
p.P32S
ACH-001688
Kidney Cancer
CCLE
GRGGLGLVS
DEG_APCC_DBOX_1
0.0556
Drug responses associated with PBX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRGGLGLVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40425
Pre-B-cell leukemia transcription factor 2
DEG_APCC_DBOX_1
14:22
GRGGLGLVS
APC,CDC20,FZR1
0.8936
More...