DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRHTLSQVP
Uniprot ID:
Q6ZV80
Source protein:
Putative uncharacterized protein LINC02898
Source gene:
LINC02898
Class:
DEG_APCC_DBOX_1
Location:
60:68
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5691
ASA_SCORE:
65.2333
COIL:
0.6777
CONS_SCORE:
1
DSS_SCORE:
0.6321
HELIX:
0.1636
FCONS_SCORE:
1
RIG_SCORE:
0.6526
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N69K
DO229035
LICA
ICGC
GRHTLSQVP
DEG_APCC_DBOX_1
0.3056
p.P68L
DO220906
MELA
ICGC
GRHTLSQVP
DEG_APCC_DBOX_1
0.6471
p.R59G
DO229208
THCA
ICGC
GRHTLSQVP
DEG_APCC_DBOX_1
0.3056
p.P54S
SIDM00375
Head and Neck Carcinoma
GDSC
GRHTLSQVP
DEG_APCC_DBOX_1
0.1667
Drug responses associated with LINC02898 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRHTLSQVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZV80
Putative uncharacterized protein LINC02898
DEG_APCC_DBOX_1
60:68
GRHTLSQVP
APC,CDC20,FZR1
0.5691
More...