DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRIILPNVN
Uniprot ID:
Q15652
Source protein:
Probable JmjC domain-containing histone demethylation protein 2C
Source gene:
JMJD1C
Class:
DEG_APCC_DBOX_1
Location:
1352:1360
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9834
ASA_SCORE:
73.2778
COIL:
0.8256
CONS_SCORE:
0.3223
DSS_SCORE:
0.448
HELIX:
0.0177
FCONS_SCORE:
1.1038
RIG_SCORE:
0.7585
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1359L
TCGA-44-7670
LUAD
TCGA
GRIILPNVN
DEG_APCC_DBOX_1
0.5654
p.G1349R
TCGA-AN-A046
BRCA
TCGA
GRIILPNVN
DEG_APCC_DBOX_1
0.25
p.D1362H
TCGA-MT-A67F
HNSC
TCGA
GRIILPNVN
DEG_APCC_DBOX_1
0.2778
p.D1343N
DO48457
BLCA
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.0833
p.E1358Q
DO49759
BLCA
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.6744
p.K1348T
DO8730
COAD
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.2222
p.K1344T
DO8264
COAD
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.2222
p.K1344T
DO41799
UCEC
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.2222
p.V1356A
DO52438
COCA
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.6936
p.T1346S
DO228067
EOPC
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.1667
p.A1369T
DO50970
LICA
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.0833
p.I1360S
DO46897
RECA
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.7341
p.E1358D
DO43186
UCEC
ICGC
GRIILPNVN
DEG_APCC_DBOX_1
0.6758
p.H1365D
SIDM00562
Breast Carcinoma
GDSC
GRIILPNVN
DEG_APCC_DBOX_1
0.1944
p.H1365D
ACH-002163
Breast Cancer
CCLE
GRIILPNVN
DEG_APCC_DBOX_1
0.1944
p.H1365D
MRK-nu-1
breast
COSMIC
GRIILPNVN
DEG_APCC_DBOX_1
0.1944
p.G1352R
ACH-000923
Lymphoma
CCLE
GRIILPNVN
DEG_APCC_DBOX_1
0.6457
p.H1365L
SW1710
urinary_tract
COSMIC
GRIILPNVN
DEG_APCC_DBOX_1
0.1944
p.V1351L
KMH-2
thyroid
COSMIC
GRIILPNVN
DEG_APCC_DBOX_1
0.3056
p.S1360R
SCC-9
upper_aerodigestive_tract
COSMIC
GRIILPNVN
DEG_APCC_DBOX_1
0.7427
p.N1349H
HT-115
large_intestine
COSMIC
GRIILPNVN
DEG_APCC_DBOX_1
0.25
Drug responses associated with JMJD1C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRIILPNVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_APCC_DBOX_1
1352:1360
GRIILPNVN
APC,CDC20,FZR1
0.9834
More...