DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
GRKDLQHLS
Uniprot ID:
Q02575
Source protein:
Helix-loop-helix protein 1
Source gene:
NHLH1
Class:
DEG_APCC_DBOX_1
Location:
54:62
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6536
ASA_SCORE:
102.8667
COIL:
0.7178
CONS_SCORE:
0.5842
DSS_SCORE:
0.8021
HELIX:
0.2737
FCONS_SCORE:
0.8725
RIG_SCORE:
0.6532
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R55Q
TCGA-A6-6781
COAD
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.7329
p.R55Q
DO8447
COAD
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.7329
p.R55Q
DO222908
MELA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.7329
p.A72T
TCGA-AC-A62V
BRCA
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
TCGA-AJ-A3BH
UCEC
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
TCGA-B5-A3FC
UCEC
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
TCGA-EV-5901
KIRP
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
DO50024
BRCA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
DO20802
KIRP
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
DO41638
UCEC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.A72T
DO41871
UCEC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0556
p.R66C
TCGA-BS-A0TA
UCEC
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
p.R66C
TCGA-R5-A804
STAD
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
p.R66C
DO222344
STAD
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
p.R66C
DO43298
UCEC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
p.R63C
TCGA-BS-A0VI
UCEC
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.3056
p.R63C
DO41764
UCEC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.3056
p.R69W
TCGA-D6-6516
HNSC
TCGA
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69W
DO233203
GACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69W
DO15623
HNSC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.P53H
DO230309
COCA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.3056
p.R69Q
DO233030
GACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69Q
DO233762
GACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69Q
DO49466
PACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69Q
SIDM01943
Colorectal Carcinoma
GDSC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.R69Q
ACH-001982
Metastasis
CCLE
GRKDLQHLS
DEG_APCC_DBOX_1
0.1389
p.A45S
DO233210
GACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0833
p.R63H
DO233676
GACA
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.3056
p.R71C
DO45183
LIRI
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.0833
p.R46Q
DO224610
LUSC
ICGC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1111
p.R46Q
ACH-000779
Lung Cancer
CCLE
GRKDLQHLS
DEG_APCC_DBOX_1
0.1111
p.R67Q
SIDM00014
Colorectal Carcinoma
GDSC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1944
p.R67Q
LIM1215
large_intestine
COSMIC
GRKDLQHLS
DEG_APCC_DBOX_1
0.1944
p.Q59H
SIDM00214
Colorectal Carcinoma
GDSC
GRKDLQHLS
DEG_APCC_DBOX_1
0.647
p.Q59H
ACH-000955
Colon/Colorectal Cancer
CCLE
GRKDLQHLS
DEG_APCC_DBOX_1
0.647
p.Q59H
SNU-407
large_intestine
COSMIC
GRKDLQHLS
DEG_APCC_DBOX_1
0.647
p.P50Q
ACH-000137
Brain Cancer
CCLE
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
p.P50Q
8-MG-BA
central_nervous_system
COSMIC
GRKDLQHLS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with NHLH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRKDLQHLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02575
Helix-loop-helix protein 1
DEG_APCC_DBOX_1
54:62
GRKDLQHLS
APC,CDC20,FZR1
0.6536
More...