DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRKSLQRLE
Uniprot ID:
Q96D70
Source protein:
R3H domain-containing protein 4
Source gene:
R3HDM4
Class:
DEG_APCC_DBOX_1
Location:
66:74
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9416
ASA_SCORE:
98.0444
COIL:
0.6449
CONS_SCORE:
0.6845
DSS_SCORE:
0.4311
HELIX:
0.3016
FCONS_SCORE:
1.2152
RIG_SCORE:
0.7517
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K65R
TCGA-A5-A1OF
UCEC
TCGA
GRKSLQRLE
DEG_APCC_DBOX_1
0.3056
p.R72H
TCGA-IB-7651
PAAD
TCGA
GRKSLQRLE
DEG_APCC_DBOX_1
0.7133
p.Y57H
DO8858
COAD
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.0833
p.Y57H
SNU-175
large_intestine
COSMIC
GRKSLQRLE
DEG_APCC_DBOX_1
0.0833
p.L68P
DO229010
COCA
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.7582
p.L68P
DO229005
COCA
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.7582
p.L68P
DO228947
LICA
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.7582
p.G67V
DO52018
LUSC
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.7532
p.P82Q
DO50278
SKCM
ICGC
GRKSLQRLE
DEG_APCC_DBOX_1
0.1111
p.Y78H
SIDM00216
Colorectal Carcinoma
GDSC
GRKSLQRLE
DEG_APCC_DBOX_1
0.2222
p.Y78H
ACH-000989
Colon/Colorectal Cancer
CCLE
GRKSLQRLE
DEG_APCC_DBOX_1
0.2222
p.Y78H
SNU-175
large_intestine
COSMIC
GRKSLQRLE
DEG_APCC_DBOX_1
0.2222
p.G67S
OAW-28
ovary
COSMIC
GRKSLQRLE
DEG_APCC_DBOX_1
0.6993
p.G67S
SW684
soft_tissue
COSMIC
GRKSLQRLE
DEG_APCC_DBOX_1
0.6993
p.E72Q
LU-134-A
lung
COSMIC
GRKSLQRLE
DEG_APCC_DBOX_1
0.6744
Drug responses associated with R3HDM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRKSLQRLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96D70
R3H domain-containing protein 4
DEG_APCC_DBOX_1
66:74
GRKSLQRLE
APC,CDC20,FZR1
0.9416
More...