DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRLLLVRVG
Uniprot ID:
Q9UP52
Source protein:
Transferrin receptor protein 2
Source gene:
TFR2
Class:
DEG_APCC_DBOX_1
Location:
268:276
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6099
ASA_SCORE:
23.1556
COIL:
0.35
CONS_SCORE:
0.6007
DSS_SCORE:
0.0391
HELIX:
0.0147
FCONS_SCORE:
1.251
RIG_SCORE:
0.9094
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L271M
TCGA-55-8616
LUAD
TCGA
GRLLLVRVG
DEG_APCC_DBOX_1
0.5999
p.L271M
DO23566
LUAD
ICGC
GRLLLVRVG
DEG_APCC_DBOX_1
0.5999
p.T285A
TCGA-D1-A103
UCEC
TCGA
GRLLLVRVG
DEG_APCC_DBOX_1
0.0833
p.T285A
DO42312
UCEC
ICGC
GRLLLVRVG
DEG_APCC_DBOX_1
0.0833
p.R262S
DO228404
BRCA
ICGC
GRLLLVRVG
DEG_APCC_DBOX_1
0.1667
p.D258E
DO228974
LICA
ICGC
GRLLLVRVG
DEG_APCC_DBOX_1
0.0556
p.V284L
DO50816
LIRI
ICGC
GRLLLVRVG
DEG_APCC_DBOX_1
0.1111
p.F280L
SIDM00499
Prostate Carcinoma
GDSC
GRLLLVRVG
DEG_APCC_DBOX_1
0.2222
p.F280L
SIDM00485
Oral Cavity Carcinoma
GDSC
GRLLLVRVG
DEG_APCC_DBOX_1
0.2222
p.V277A
SIDM01146
Gastric Carcinoma
GDSC
GRLLLVRVG
DEG_APCC_DBOX_1
0.3056
p.V277A
ACH-000932
Gastric Cancer
CCLE
GRLLLVRVG
DEG_APCC_DBOX_1
0.3056
p.V277A
NCI-SNU-1
stomach
COSMIC
GRLLLVRVG
DEG_APCC_DBOX_1
0.3056
Drug responses associated with TFR2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRLLLVRVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UP52
Transferrin receptor protein 2
DEG_APCC_DBOX_1
268:276
GRLLLVRVG
APC,CDC20,FZR1
0.6099
More...