DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRLSLQDVP
Uniprot ID:
Q8N5W9
Source protein:
Refilin-B
Source gene:
RFLNB
Class:
DEG_APCC_DBOX_1
Location:
3:11
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8645
ASA_SCORE:
66.8333
COIL:
0.6388
CONS_SCORE:
0.7723
DSS_SCORE:
0.6401
HELIX:
0.1866
FCONS_SCORE:
1.147
RIG_SCORE:
0.7704
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1N
SIDM00935
Other Solid Cancers
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.3889
p.S1N
SIDM01110
Hepatocellular Carcinoma
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.3889
p.S1N
SIDM00853
Other Sarcomas
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.3889
p.A3P
SIDM00907
Burkitt's Lymphoma
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.7503
p.A3P
SIDM00431
T-Lymphoblastic Leukemia
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.7503
p.A3P
SIDM00760
Small Cell Lung Carcinoma
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.7503
p.A12V
SIDM00217
Colorectal Carcinoma
GDSC
GRLSLQDVP
DEG_APCC_DBOX_1
0.3056
p.A12V
SNU-1040
large_intestine
COSMIC
GRLSLQDVP
DEG_APCC_DBOX_1
0.3056
Drug responses associated with RFLNB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRLSLQDVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5W9
Refilin-B
DEG_APCC_DBOX_1
3:11
GRLSLQDVP
APC,CDC20,FZR1
0.8645
More...