DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRNSLSPVQ
Uniprot ID:
O00515
Source protein:
Ladinin-1
Source gene:
LAD1
Class:
DEG_APCC_DBOX_1
Location:
118:126
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9889
ASA_SCORE:
99.2667
COIL:
0.9219
CONS_SCORE:
0.3911
DSS_SCORE:
0.5889
HELIX:
0.042
FCONS_SCORE:
0.8408
RIG_SCORE:
0.6237
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S123R
TCGA-06-1800
GBM
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.7427
p.Q129H
TCGA-A5-A0G2
UCEC
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.25
p.A127T
TCGA-B5-A5OC
UCEC
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.3056
p.E111K
TCGA-D9-A6EA
SKCM
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.1389
p.P108S
TCGA-EB-A3XB
SKCM
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.0556
p.E117D
TCGA-EE-A2M5
SKCM
TCGA
GRNSLSPVQ
DEG_APCC_DBOX_1
0.3056
p.V115G
DO48392
BLCA
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.25
p.A119E
DO228948
LICA
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.7701
p.R113P
DO218921
LUAD
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.1944
p.R109Q
DO37679
SKCM
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.0833
p.P122S
DO37856
SKCM
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.6752
p.E131D
DO37425
SKCM
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.1944
p.E125K
DO50290
SKCM
ICGC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.7022
p.R119G
ACH-000588
Myeloma
CCLE
GRNSLSPVQ
DEG_APCC_DBOX_1
0.7568
p.V116G
SNU-407
large_intestine
COSMIC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.2778
p.R109W
NCI-H2347
lung
COSMIC
GRNSLSPVQ
DEG_APCC_DBOX_1
0.0833
Drug responses associated with LAD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRNSLSPVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00515
Ladinin-1
DEG_APCC_DBOX_1
118:126
GRNSLSPVQ
APC,CDC20,FZR1
0.9889
More...