DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRPGLDGVK
Uniprot ID:
Q8IZC6
Source protein:
Collagen alpha-1
Source gene:
COL27A1
Class:
DEG_APCC_DBOX_1
Location:
970:978
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9862
ASA_SCORE:
78.2556
COIL:
0.9441
CONS_SCORE:
0.574
DSS_SCORE:
0.8189
HELIX:
0.0139
FCONS_SCORE:
1.0422
RIG_SCORE:
0.5809
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G970V
TCGA-50-5930
LUAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.6421
p.G970V
DO25189
LUAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.6421
p.R965M
TCGA-55-6979
LUAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.1944
p.R965M
DO24110
LUAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1944
p.P987L
TCGA-5M-AAT6
COAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.0833
p.P987L
DO223703
COAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.0833
p.R986Q
TCGA-96-7544
LUSC
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.R986Q
DO26425
LUSC
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.R986W
TCGA-AA-A00N
COAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.R986W
DO9876
COAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.G976V
TCGA-CR-7364
HNSC
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.6421
p.G976V
DO15679
HNSC
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.6421
p.P969L
TCGA-DA-A1HV
SKCM
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.3056
p.P969L
DO37659
SKCM
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.3056
p.P969H
TCGA-ER-A19P
SKCM
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.3056
p.P969H
DO47623
SKCM
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.3056
p.G964D
TCGA-HD-A6HZ
HNSC
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.1667
p.G964D
DO49998
HNSC
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1667
p.G964D
SIDM00217
Colorectal Carcinoma
GDSC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1667
p.G964D
ACH-000999
Colon/Colorectal Cancer
CCLE
GRPGLDGVK
DEG_APCC_DBOX_1
0.1667
p.G964D
SNU-1040
large_intestine
COSMIC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1667
p.Q962H
TCGA-HT-A61C
LGG
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.Q962H
DO219813
LGG
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.V977M
TCGA-NH-A5IV
COAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.6097
p.V977M
DO49095
COAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.6097
p.G976D
TCGA-VQ-A8P2
STAD
TCGA
GRPGLDGVK
DEG_APCC_DBOX_1
0.6087
p.G976D
DO51761
STAD
ICGC
GRPGLDGVK
DEG_APCC_DBOX_1
0.6087
p.G988W
SIDM00120
Prostate Carcinoma
GDSC
GRPGLDGVK
DEG_APCC_DBOX_1
0.0556
p.G988W
ACH-000979
Prostate Cancer
CCLE
GRPGLDGVK
DEG_APCC_DBOX_1
0.0556
p.G988W
DU-145
prostate
COSMIC
GRPGLDGVK
DEG_APCC_DBOX_1
0.0556
p.R986P
ACH-000526
Non-Cancerous
CCLE
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
p.R986L
ACH-001607
Gallbladder Cancer
CCLE
GRPGLDGVK
DEG_APCC_DBOX_1
0.1111
Drug responses associated with COL27A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRPGLDGVK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZC6
Collagen alpha-1
DEG_APCC_DBOX_1
970:978
GRPGLDGVK
APC,CDC20,FZR1
0.9862
More...