DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRQHLFLLQ
Uniprot ID:
Q5SRH9
Source protein:
Tetratricopeptide repeat protein 39A
Source gene:
TTC39A
Class:
DEG_APCC_DBOX_1
Location:
169:177
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9027
ASA_SCORE:
61.9556
COIL:
0.455
CONS_SCORE:
-111.0129
DSS_SCORE:
0.3456
HELIX:
0.4673
FCONS_SCORE:
2.4561
RIG_SCORE:
0.7871
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P185S
TCGA-A5-A0G2
UCEC
TCGA
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.H184Y
TCGA-AB-2826
LAML
TCGA
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1389
p.R166H
DO224865
BRCA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.25
p.R166H
DO230346
COCA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.25
p.I185M
DO49964
CESC
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.F180I
DO233813
GACA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.25
p.P161Q
DO228934
LICA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.Q173K
DO228978
LICA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.6944
p.L172M
DO229032
LICA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.711
p.Q167H
DO232224
PBCA
ICGC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.2778
p.E179K
SIDM00185
Melanoma
GDSC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.2778
p.E179K
SIDM00054
Pancreatic Carcinoma
GDSC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.2778
p.E179K
LB2518-MEL
skin
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.2778
p.H172R
SIDM01259
B-Lymphoblastic Leukemia
GDSC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.7133
p.H172R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.7133
p.A161T
SIDM01617
Endometrial Carcinoma
GDSC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.A161T
ACH-000994
Endometrial/Uterine Cancer
CCLE
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.H168R
ACH-001669
Leukemia
CCLE
GRQHLFLLQ
DEG_APCC_DBOX_1
0.3056
p.H168R
ACH-002238
Leukemia
CCLE
GRQHLFLLQ
DEG_APCC_DBOX_1
0.3056
p.H168R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.3056
p.E175K
ACH-002152
Skin Cancer
CCLE
GRQHLFLLQ
DEG_APCC_DBOX_1
0.7022
p.E175K
LB2518-MEL
skin
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.7022
p.P182L
RKN
ovary
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1944
p.P182L
NB(TU)1-10
autonomic_ganglia
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1944
p.E178K
LB2518-MEL
skin
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.3056
p.P185L
RKN
ovary
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.P185L
NB(TU)1-10
autonomic_ganglia
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.1111
p.H171R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
GRQHLFLLQ
DEG_APCC_DBOX_1
0.8244
Drug responses associated with TTC39A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRQHLFLLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SRH9
Tetratricopeptide repeat protein 39A
DEG_APCC_DBOX_1
169:177
GRQHLFLLQ
APC,CDC20,FZR1
0.9027
More...