DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRQSLMEMQ
Uniprot ID:
Q96CV9
Source protein:
Optineurin
Source gene:
OPTN
Class:
DEG_APCC_DBOX_1
Location:
510:518
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.687
ASA_SCORE:
104.8667
COIL:
0.1387
CONS_SCORE:
0.6227
DSS_SCORE:
0.5935
HELIX:
0.8653
FCONS_SCORE:
1.1321
RIG_SCORE:
0.6871
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R520C
TCGA-A5-A0G2
UCEC
TCGA
GRQSLMEMQ
DEG_APCC_DBOX_1
0.2778
p.R520C
DO41235
UCEC
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.2778
p.G509R
TCGA-BR-8060
STAD
TCGA
GRQSLMEMQ
DEG_APCC_DBOX_1
0.3056
p.G509R
DO38205
STAD
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.3056
p.K501E
TCGA-IG-A5B8
ESCA
TCGA
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5278
p.A523V
DO222737
COCA
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.1944
p.R511S
DO228929
LICA
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.7427
p.G522V
DO228971
LICA
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.2222
p.G522V
DO229041
LICA
ICGC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.2222
p.E516Q
SIDM00934
Pancreatic Carcinoma
GDSC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5633
p.E516Q
ACH-000354
Pancreatic Cancer
CCLE
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5633
p.E516Q
CAPAN-1
pancreas
COSMIC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5633
p.R524K
SIDM00537
Colorectal Carcinoma
GDSC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.1667
p.R524K
ACH-000982
Colon/Colorectal Cancer
CCLE
GRQSLMEMQ
DEG_APCC_DBOX_1
0.1667
p.R524K
ACH-001345
Colon/Colorectal Cancer
CCLE
GRQSLMEMQ
DEG_APCC_DBOX_1
0.1667
p.R524K
GP5d
large_intestine
COSMIC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.1667
p.T525A
SIDM01608
Endometrial Carcinoma
GDSC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5833
p.T525A
ACH-000990
Endometrial/Uterine Cancer
CCLE
GRQSLMEMQ
DEG_APCC_DBOX_1
0.5833
p.R518K
GP5d
large_intestine
COSMIC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.7237
p.E510Q
CAPAN-1
pancreas
COSMIC
GRQSLMEMQ
DEG_APCC_DBOX_1
0.6744
Drug responses associated with OPTN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRQSLMEMQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96CV9
Optineurin
DEG_APCC_DBOX_1
510:518
GRQSLMEMQ
APC,CDC20,FZR1
0.687
More...