DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
GRRALRSLA
Uniprot ID:
Q8NES3
Source protein:
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
Source gene:
LFNG
Class:
DEG_APCC_DBOX_1
Location:
38:46
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6214
ASA_SCORE:
87.7222
COIL:
0.5974
CONS_SCORE:
0.3474
DSS_SCORE:
0.5292
HELIX:
0.3322
FCONS_SCORE:
1.2337
RIG_SCORE:
0.6991
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R29M
TCGA-3Z-A93Z
KIRC
TCGA
GRRALRSLA
DEG_APCC_DBOX_1
0.0833
p.R29M
DO219229
KIRC
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.0833
p.E33K
TCGA-66-2773
LUSC
TCGA
GRRALRSLA
DEG_APCC_DBOX_1
0.1944
p.E33K
DO26536
LUSC
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.1944
p.R44I
TCGA-AJ-A3EL
UCEC
TCGA
GRRALRSLA
DEG_APCC_DBOX_1
0.8102
p.R44I
DO233293
NACA
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.8102
p.R44I
DO41542
UCEC
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.8102
p.D55G
DO52478
COCA
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.0833
p.T42M
DO228967
LICA
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.7423
p.P48S
DO220851
MELA
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.2778
p.M35R
DO46420
OV
ICGC
GRRALRSLA
DEG_APCC_DBOX_1
0.25
p.G28R
SIDM00353
Other Sarcomas
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.0556
p.G28R
SIDM01526
Mesothelioma
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.0556
p.G28R
SIDM00163
Biliary Tract Carcinoma
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.0556
p.D43N
SIDM00189
Melanoma
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.6932
p.D43N
ACH-002098
Skin Cancer
CCLE
GRRALRSLA
DEG_APCC_DBOX_1
0.6932
p.T46I
SIDM01004
Chronic Myelogenous Leukemia
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.7078
p.T46I
SIDM00277
Acute Myeloid Leukemia
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.7078
p.T46I
SIDM01706
Hodgkin's Lymphoma
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.7078
p.E39K
SIDM01082
Oral Cavity Carcinoma
GDSC
GRRALRSLA
DEG_APCC_DBOX_1
0.7022
p.E39K
ACH-000188
Head and Neck Cancer
CCLE
GRRALRSLA
DEG_APCC_DBOX_1
0.7022
p.G52A
ACH-002040
Skin Cancer
CCLE
GRRALRSLA
DEG_APCC_DBOX_1
0.1667
p.Q46R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
GRRALRSLA
DEG_APCC_DBOX_1
0.7329
p.Q44R
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
GRRALRSLA
DEG_APCC_DBOX_1
0.7329
Drug responses associated with LFNG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRRALRSLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NES3
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
DEG_APCC_DBOX_1
38:46
GRRALRSLA
APC,CDC20,FZR1
0.6214
More...