DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRRALRSVS
Uniprot ID:
Q96P71
Source protein:
N-terminal EF-hand calcium-binding protein 3
Source gene:
NECAB3
Class:
DEG_APCC_DBOX_1
Location:
194:202
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9077
ASA_SCORE:
92.3111
COIL:
0.6822
CONS_SCORE:
0.5069
DSS_SCORE:
0.5065
HELIX:
0.2377
FCONS_SCORE:
1.2939
RIG_SCORE:
0.6699
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R195L
DO229259
THCA
ICGC
GRRALRSVS
DEG_APCC_DBOX_1
0.8428
p.R195C
TCGA-G4-6309
COAD
TCGA
GRRALRSVS
DEG_APCC_DBOX_1
0.8301
p.R195C
DO7810
COAD
ICGC
GRRALRSVS
DEG_APCC_DBOX_1
0.8301
p.R203W
ACH-000218
Leukemia
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-000570
Brain Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-000577
Liver Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-000941
Endometrial/Uterine Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-000954
Endometrial/Uterine Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-001060
Lymphoma
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-001515
Cervical Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R203W
ACH-001517
Endometrial/Uterine Cancer
CCLE
GRRALRSVS
DEG_APCC_DBOX_1
0.3056
p.R191W
SIDM00945
Colorectal Carcinoma
GDSC
GRRALRSVS
DEG_APCC_DBOX_1
0.25
p.S208F
TCGA-DX-A8BP
SARC
TCGA
GRRALRSVS
DEG_APCC_DBOX_1
0.1667
p.S208F
DO220056
SARC
ICGC
GRRALRSVS
DEG_APCC_DBOX_1
0.1667
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Drug responses associated with NECAB3 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of GRRALRSVS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96P71
N-terminal EF-hand calcium-binding protein 3
DEG_APCC_DBOX_1
194:202
GRRALRSVS
APC,CDC20,FZR1
0.9077
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