DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRSPLDPMT
Uniprot ID:
Q08499
Source protein:
cAMP-specific 3',5'-cyclic phosphodiesterase 4D
Source gene:
PDE4D
Class:
DEG_APCC_DBOX_1
Location:
162:170
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9953
ASA_SCORE:
68.8889
COIL:
0.8582
CONS_SCORE:
0.3434
DSS_SCORE:
0.6183
HELIX:
0.0687
FCONS_SCORE:
1.0257
RIG_SCORE:
0.6424
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A161V
TCGA-AX-A2HC
UCEC
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.3056
p.A161V
TCGA-EY-A1GL
UCEC
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.3056
p.A161V
DO41572
UCEC
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.3056
p.A161V
DO41181
UCEC
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.3056
p.G158S
TCGA-CC-5258
LIHC
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.2222
p.G158S
DO22881
LIHC
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.2222
p.M169T
TCGA-CK-5916
COAD
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.7423
p.M169T
DO8786
COAD
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.7423
p.R163W
TCGA-D1-A16F
UCEC
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.8634
p.R163W
DO233737
GACA
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.8634
p.R163W
DO42408
UCEC
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.8634
p.P165S
TCGA-DA-A1IC
SKCM
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.5641
p.P165S
DO37430
SKCM
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.5641
p.Q179K
TCGA-DU-7294
LGG
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.0833
p.Q179K
DO22333
LGG
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.0833
p.R163Q
TCGA-EY-A549
UCEC
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.7329
p.R163Q
DO48174
UCEC
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.7329
p.S174F
TCGA-FS-A1ZK
SKCM
TCGA
GRSPLDPMT
DEG_APCC_DBOX_1
0.6667
p.S174F
DO37474
SKCM
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.6667
p.I177V
DO231954
LICA
ICGC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1389
p.D167Y
SIDM00265
Ewing's Sarcoma
GDSC
GRSPLDPMT
DEG_APCC_DBOX_1
0.6214
p.D167Y
ES3
bone
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.6214
p.T180S
ACH-000126
Brain Cancer
CCLE
GRSPLDPMT
DEG_APCC_DBOX_1
0.0556
p.R173Q
ACH-000895
Colon/Colorectal Cancer
CCLE
GRSPLDPMT
DEG_APCC_DBOX_1
0.25
p.R173Q
ACH-000986
Colon/Colorectal Cancer
CCLE
GRSPLDPMT
DEG_APCC_DBOX_1
0.25
p.R173Q
HT-115
large_intestine
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.25
p.R173Q
CL-34
large_intestine
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.25
p.R170Q
ACH-000996
Endometrial/Uterine Cancer
CCLE
GRSPLDPMT
DEG_APCC_DBOX_1
0.7329
p.V178I
SK-UT-1
soft_tissue
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1111
p.R176Q
HT-115
large_intestine
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1667
p.R176Q
CL-34
large_intestine
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1667
p.V170I
SK-UT-1
soft_tissue
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.7076
p.V164I
SK-UT-1
soft_tissue
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.7076
p.V169I
SK-UT-1
soft_tissue
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.7076
p.V159A
AN3-CA
endometrium
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.25
p.V162A
AN3-CA
endometrium
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.6936
p.Y156H
NCI-H322M
lung
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1667
p.T157I
EN
endometrium
COSMIC
GRSPLDPMT
DEG_APCC_DBOX_1
0.1944
Drug responses associated with PDE4D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRSPLDPMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q08499
cAMP-specific 3',5'-cyclic phosphodiesterase 4D
DEG_APCC_DBOX_1
162:170
GRSPLDPMT
APC,CDC20,FZR1
0.9953
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