DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRSSLKEIE
Uniprot ID:
O43543
Source protein:
DNA repair protein XRCC2
Source gene:
XRCC2
Class:
DEG_APCC_DBOX_1
Location:
20:28
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9024
ASA_SCORE:
60.7222
COIL:
0.7008
CONS_SCORE:
0.4252
DSS_SCORE:
0.4187
HELIX:
0.2172
FCONS_SCORE:
0.9348
RIG_SCORE:
0.7235
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R17Q
TCGA-DU-6392
LGG
TCGA
GRSSLKEIE
DEG_APCC_DBOX_1
0.25
p.R17Q
DO22237
LGG
ICGC
GRSSLKEIE
DEG_APCC_DBOX_1
0.25
p.S37L
TCGA-F5-6814
READ
TCGA
GRSSLKEIE
DEG_APCC_DBOX_1
0.0833
p.S37L
DO36556
READ
ICGC
GRSSLKEIE
DEG_APCC_DBOX_1
0.0833
p.L24F
DO228246
BRCA
ICGC
GRSSLKEIE
DEG_APCC_DBOX_1
0.6981
p.T12N
DO229024
LICA
ICGC
GRSSLKEIE
DEG_APCC_DBOX_1
0.5556
p.A33T
SIDM00985
Burkitt's Lymphoma
GDSC
GRSSLKEIE
DEG_APCC_DBOX_1
0.1944
p.A33T
ACH-000245
Lymphoma
CCLE
GRSSLKEIE
DEG_APCC_DBOX_1
0.1944
p.A33T
BL-41
haematopoietic_and_lymphoid_tissue
COSMIC
GRSSLKEIE
DEG_APCC_DBOX_1
0.1944
p.S10F
ACH-001694
Head and Neck Cancer
CCLE
GRSSLKEIE
DEG_APCC_DBOX_1
0.5
Drug responses associated with XRCC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRSSLKEIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43543
DNA repair protein XRCC2
DEG_APCC_DBOX_1
20:28
GRSSLKEIE
APC,CDC20,FZR1
0.9024
More...