DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GRVTLSNVS
Uniprot ID:
Q9UKX5
Source protein:
Integrin alpha-11
Source gene:
ITGA11
Class:
DEG_APCC_DBOX_1
Location:
89:97
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6197
ASA_SCORE:
72.1444
COIL:
0.7656
CONS_SCORE:
0.4471
DSS_SCORE:
0.3346
HELIX:
0.0849
FCONS_SCORE:
0.8965
RIG_SCORE:
0.8168
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R104L
TCGA-05-4390
LUAD
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.R104L
DO23562
LUAD
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.G81R
TCGA-BR-4253
STAD
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.G81R
DO38455
STAD
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.G81R
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.G81R
ACH-000893
Lung Cancer
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.G81R
NCI-H1651
lung
COSMIC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.E98K
TCGA-CC-A7IF
LIHC
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
DO52177
LIHC
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
SIDM00125
Kidney Carcinoma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
SIDM01138
Pancreatic Carcinoma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
ACH-000139
Pancreatic Cancer
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
ACH-000649
Kidney Cancer
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
PANC-03-27
pancreas
COSMIC
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.E98K
786-0
kidney
COSMIC
GRVTLSNVS
DEG_APCC_DBOX_1
0.3056
p.G81W
TCGA-EE-A20F
SKCM
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.G81W
DO37961
SKCM
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1111
p.R99L
TCGA-ER-A2NH
SKCM
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.2778
p.R99L
DO47683
SKCM
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.2778
p.M103T
TCGA-UY-A8OB
BLCA
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.1667
p.M103T
DO219037
BLCA
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1667
p.G89E
TCGA-YG-AA3O
SKCM
TCGA
GRVTLSNVS
DEG_APCC_DBOX_1
0.6087
p.G89E
DO51299
SKCM
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.6087
p.R104H
DO232224
PBCA
ICGC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.N82K
SIDM00131
Glioma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.N82K
ACH-000329
Brain Cancer
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.N82K
CCF-STTG1
central_nervous_system
COSMIC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1389
p.V96M
SIDM01198
Burkitt's Lymphoma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.6097
p.N102S
SIDM00118
Colorectal Carcinoma
GDSC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1944
p.N102S
ACH-001081
Colon/Colorectal Cancer
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.1944
p.N102S
HCC2998
large_intestine
COSMIC
GRVTLSNVS
DEG_APCC_DBOX_1
0.1944
p.M103L
ACH-001751
Sarcoma
CCLE
GRVTLSNVS
DEG_APCC_DBOX_1
0.1667
Drug responses associated with ITGA11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GRVTLSNVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKX5
Integrin alpha-11
DEG_APCC_DBOX_1
89:97
GRVTLSNVS
APC,CDC20,FZR1
0.6197
More...