DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HPDGTPPK
Uniprot ID:
Q14005
Source protein:
Pro-interleukin-16 [Cleaved into: Interleukin-16
Source gene:
IL16
Class:
DEG_SCF_SKP2-CKS1_1
Location:
753:760
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9941
ASA_SCORE:
88.65
COIL:
0.9419
CONS_SCORE:
0.507
DSS_SCORE:
0.8329
HELIX:
0.0274
FCONS_SCORE:
1.166
RIG_SCORE:
0.572
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D762N
TCGA-55-1592
LUAD
TCGA
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.2778
p.T750I
TCGA-AP-A051
UCEC
TCGA
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.25
p.G749E
TCGA-CJ-4923
KIRC
TCGA
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A764T
TCGA-CQ-5332
HNSC
TCGA
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A764T
SIDM02015
Colorectal Carcinoma
GDSC
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.2222
p.P758S
TCGA-ER-A19D
SKCM
TCGA
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.6752
p.E748K
SIDM00995
Other Solid Cancers
GDSC
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.1944
p.E748K
ACH-001328
Skin Cancer
CCLE
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.1944
p.E748K
A431
skin
COSMIC
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.1944
p.D755N
ACH-001982
Metastasis
CCLE
HPDGTPPK
DEG_SCF_SKP2-CKS1_1
0.6932
Drug responses associated with IL16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HPDGTPPK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14005
Pro-interleukin-16 [Cleaved into: Interleukin-16
DEG_SCF_SKP2-CKS1_1
753:760
HPDGTPPK
SKP2,CSK1
0.9941
More...