DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
HPTAKVAPS
Uniprot ID:
Q96IJ6
Source protein:
Mannose-1-phosphate guanyltransferase alpha
Source gene:
GMPPA
Class:
DEG_SIAH_1
Location:
290:298
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.6245
ASA_SCORE:
64.5222
COIL:
0.7431
CONS_SCORE:
0.4058
DSS_SCORE:
0.2438
HELIX:
0.0042
FCONS_SCORE:
1.0194
RIG_SCORE:
0.7969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N304D
TCGA-AP-A0LM
UCEC
TCGA
HPTAKVAPS
DEG_SIAH_1
0.1667
p.N304D
DO43306
UCEC
ICGC
HPTAKVAPS
DEG_SIAH_1
0.1667
p.P291L
TCGA-BR-7707
STAD
TCGA
HPTAKVAPS
DEG_SIAH_1
0.7582
p.P291L
DO38487
STAD
ICGC
HPTAKVAPS
DEG_SIAH_1
0.7582
p.S306F
TCGA-D3-A8GK
SKCM
TCGA
HPTAKVAPS
DEG_SIAH_1
0.5556
p.S306F
DO50286
SKCM
ICGC
HPTAKVAPS
DEG_SIAH_1
0.5556
p.P303S
TCGA-GN-A26C
SKCM
TCGA
HPTAKVAPS
DEG_SIAH_1
0.1944
p.P303S
DO37782
SKCM
ICGC
HPTAKVAPS
DEG_SIAH_1
0.1944
p.A293T
TCGA-N6-A4VD
UCS
TCGA
HPTAKVAPS
DEG_SIAH_1
0.7139
p.R284Q
DO689
BLCA
ICGC
HPTAKVAPS
DEG_SIAH_1
0.1667
p.S308L
DO6254
CESC
ICGC
HPTAKVAPS
DEG_SIAH_1
0.0556
p.G280C
DO229037
LICA
ICGC
HPTAKVAPS
DEG_SIAH_1
0.0556
p.V305A
DO50922
LICA
ICGC
HPTAKVAPS
DEG_SIAH_1
0.1389
p.S298L
DO230961
LUSC
ICGC
HPTAKVAPS
DEG_SIAH_1
0.6556
p.S298L
DO224594
LUSC
ICGC
HPTAKVAPS
DEG_SIAH_1
0.6556
p.W282L
SIDM01196
Hepatocellular Carcinoma
GDSC
HPTAKVAPS
DEG_SIAH_1
0.1111
p.W282L
SNU-475
liver
COSMIC
HPTAKVAPS
DEG_SIAH_1
0.1111
Drug responses associated with GMPPA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HPTAKVAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96IJ6
Mannose-1-phosphate guanyltransferase alpha
DEG_SIAH_1
290:298
HPTAKVAPS
SIAH1,SIAH2,SIAH3
0.6245
More...