DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HRADLCDVA
Uniprot ID:
Q9Y242
Source protein:
Transcription factor 19
Source gene:
TCF19
Class:
DEG_APCC_DBOX_1
Location:
35:43
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5246
ASA_SCORE:
45.4444
COIL:
0.6177
CONS_SCORE:
0.8013
DSS_SCORE:
0.2124
HELIX:
0.1201
FCONS_SCORE:
1.2321
RIG_SCORE:
0.8492
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E49D
TCGA-EJ-5503
PRAD
TCGA
HRADLCDVA
DEG_APCC_DBOX_1
0.1667
p.E49D
DO36359
PRAD
ICGC
HRADLCDVA
DEG_APCC_DBOX_1
0.1667
p.A43S
TCGA-FS-A1Z4
SKCM
TCGA
HRADLCDVA
DEG_APCC_DBOX_1
0.6477
p.A43S
DO37462
SKCM
ICGC
HRADLCDVA
DEG_APCC_DBOX_1
0.6477
p.G34C
DO225361
BRCA
ICGC
HRADLCDVA
DEG_APCC_DBOX_1
0.3056
p.R45W
DO229213
THCA
ICGC
HRADLCDVA
DEG_APCC_DBOX_1
0.2778
p.G26R
SIDM00794
Other Solid Cancers
GDSC
HRADLCDVA
DEG_APCC_DBOX_1
0.0833
p.R32H
ACH-001377
Pancreatic Cancer
CCLE
HRADLCDVA
DEG_APCC_DBOX_1
0.25
Drug responses associated with TCF19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRADLCDVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y242
Transcription factor 19
DEG_APCC_DBOX_1
35:43
HRADLCDVA
APC,CDC20,FZR1
0.5246
More...