DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HRAGLAKII
Uniprot ID:
O94953
Source protein:
Lysine-specific demethylase 4B
Source gene:
KDM4B
Class:
DEG_APCC_DBOX_1
Location:
41:49
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9303
ASA_SCORE:
56.7222
COIL:
0.446
CONS_SCORE:
0.6165
DSS_SCORE:
0.345
HELIX:
0.2101
FCONS_SCORE:
1.1794
RIG_SCORE:
0.7744
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I35K
TCGA-AP-A0LD
UCEC
TCGA
HRAGLAKII
DEG_APCC_DBOX_1
0.1667
p.I35K
DO41578
UCEC
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.1667
p.Q58H
TCGA-AX-A2IO
UCEC
TCGA
HRAGLAKII
DEG_APCC_DBOX_1
0.0833
p.Q58H
DO40800
UCEC
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.0833
p.P51Q
TCGA-ER-A19H
SKCM
TCGA
HRAGLAKII
DEG_APCC_DBOX_1
0.2778
p.P51Q
DO47299
SKCM
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.2778
p.P51L
TCGA-NH-A5IV
COAD
TCGA
HRAGLAKII
DEG_APCC_DBOX_1
0.2778
p.P51L
DO49095
COAD
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.2778
p.R42L
TCGA-NJ-A4YI
LUAD
TCGA
HRAGLAKII
DEG_APCC_DBOX_1
0.8428
p.R42L
DO218942
LUAD
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.8428
p.I49M
DO231056
LUSC
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.6507
p.P51S
DO222843
MELA
ICGC
HRAGLAKII
DEG_APCC_DBOX_1
0.2778
p.V32M
SIDM02050
Colorectal Carcinoma
GDSC
HRAGLAKII
DEG_APCC_DBOX_1
0.0833
Drug responses associated with KDM4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRAGLAKII
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94953
Lysine-specific demethylase 4B
DEG_APCC_DBOX_1
41:49
HRAGLAKII
APC,CDC20,FZR1
0.9303
More...