DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
HRGDLGNVR
Uniprot ID:
O14618
Source protein:
Copper chaperone for superoxide dismutase
Source gene:
CCS
Class:
DEG_APCC_DBOX_1
Location:
164:172
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8996
ASA_SCORE:
49.4222
COIL:
0.4576
CONS_SCORE:
0.4983
DSS_SCORE:
0.5728
HELIX:
0.0566
FCONS_SCORE:
1.246
RIG_SCORE:
0.6639
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A179T
TCGA-21-1080
LUSC
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.1389
p.A179T
DO26502
LUSC
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.1389
p.D174H
TCGA-33-A4WN
LUSC
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.2778
p.D174H
DO219121
LUSC
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.2778
p.H164Q
TCGA-98-A53A
LUSC
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.647
p.H164Q
DO219178
LUSC
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.647
p.H155N
TCGA-A3-A6NL
KIRC
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.0833
p.H155N
DO50458
KIRC
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.0833
p.R182K
TCGA-D3-A1QB
SKCM
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.0556
p.R182K
DO47573
SKCM
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.0556
p.S161F
TCGA-D3-A8GB
SKCM
TCGA
HRGDLGNVR
DEG_APCC_DBOX_1
0.25
p.S161F
DO50280
SKCM
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.25
p.G157C
DO228948
LICA
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.1389
p.R178L
DO229015
LICA
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.1667
p.G169C
DO229025
LICA
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.6489
p.A173T
DO46542
OV
ICGC
HRGDLGNVR
DEG_APCC_DBOX_1
0.3056
p.R178C
SIDM01943
Colorectal Carcinoma
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.1667
p.R165H
SIDM00113
Kidney Carcinoma
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.8244
p.R165H
ACH-001208
Kidney Cancer
CCLE
HRGDLGNVR
DEG_APCC_DBOX_1
0.8244
p.R165H
TK10
kidney
COSMIC
HRGDLGNVR
DEG_APCC_DBOX_1
0.8244
p.H155R
SIDM01154
T-Lymphoblastic Leukemia
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.0833
p.H155R
ACH-000953
Leukemia
CCLE
HRGDLGNVR
DEG_APCC_DBOX_1
0.0833
p.H155R
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
HRGDLGNVR
DEG_APCC_DBOX_1
0.0833
p.R165C
SIDM00767
Small Cell Lung Carcinoma
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.8301
p.R165C
ACH-001136
Lung Cancer
CCLE
HRGDLGNVR
DEG_APCC_DBOX_1
0.8301
p.R165C
NCI-H187
lung
COSMIC
HRGDLGNVR
DEG_APCC_DBOX_1
0.8301
p.R163W
SIDM00875
Breast Carcinoma
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.3056
p.Q159H
SIDM01609
Endometrial Carcinoma
GDSC
HRGDLGNVR
DEG_APCC_DBOX_1
0.1944
p.Q159H
ACH-000972
Endometrial/Uterine Cancer
CCLE
HRGDLGNVR
DEG_APCC_DBOX_1
0.1944
Drug responses associated with CCS mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRGDLGNVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14618
Copper chaperone for superoxide dismutase
DEG_APCC_DBOX_1
164:172
HRGDLGNVR
APC,CDC20,FZR1
0.8996
More...