DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
HRGKLASLP
Uniprot ID:
Q5VVM6
Source protein:
Coiled-coil domain-containing protein 30
Source gene:
CCDC30
Class:
DEG_APCC_DBOX_1
Location:
642:650
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7482
ASA_SCORE:
88.4
COIL:
0.699
CONS_SCORE:
0.1812
DSS_SCORE:
0.3567
HELIX:
0.2753
FCONS_SCORE:
0.9968
RIG_SCORE:
0.7537
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L632I
TCGA-AG-A002
READ
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.0556
p.K653N
TCGA-AG-A002
READ
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.3611
p.K653N
TCGA-EI-6917
READ
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.3611
p.E657K
TCGA-D3-A8GI
SKCM
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.1389
p.P636H
TCGA-E6-A1LX
UCEC
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.1667
p.P650L
TCGA-EO-A22U
UCEC
TCGA
HRGKLASLP
DEG_APCC_DBOX_1
0.6471
p.L646V
SIDM00049
Colorectal Carcinoma
GDSC
HRGKLASLP
DEG_APCC_DBOX_1
0.6765
p.L646V
ACH-001410
Bladder Cancer
CCLE
HRGKLASLP
DEG_APCC_DBOX_1
0.6765
p.L646V
ACH-002233
Colon/Colorectal Cancer
CCLE
HRGKLASLP
DEG_APCC_DBOX_1
0.6765
p.L646V
DIFI
large_intestine
COSMIC
HRGKLASLP
DEG_APCC_DBOX_1
0.6765
p.E659K
Mewo
skin
COSMIC
HRGKLASLP
DEG_APCC_DBOX_1
0.0833
p.Y657C
NCI-H748
lung
COSMIC
HRGKLASLP
DEG_APCC_DBOX_1
0.1389
Drug responses associated with CCDC30 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRGKLASLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VVM6
Coiled-coil domain-containing protein 30
DEG_APCC_DBOX_1
642:650
HRGKLASLP
APC,CDC20,FZR1
0.7482
More...