DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HRKHLQEIP
Uniprot ID:
Q13309
Source protein:
S-phase kinase-associated protein 2
Source gene:
SKP2
Class:
DEG_APCC_DBOX_1
Location:
2:10
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9859
ASA_SCORE:
113.0556
COIL:
0.8234
CONS_SCORE:
0.3702
DSS_SCORE:
0.6416
HELIX:
0.1646
FCONS_SCORE:
0.9078
RIG_SCORE:
0.7743
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P10T
TCGA-AN-A046
BRCA
TCGA
HRKHLQEIP
DEG_APCC_DBOX_1
0.5919
p.P10T
DO1285
BRCA
ICGC
HRKHLQEIP
DEG_APCC_DBOX_1
0.5919
p.K4R
TCGA-DD-A1EK
LIHC
TCGA
HRKHLQEIP
DEG_APCC_DBOX_1
0.6126
p.K4R
DO48492
LIHC
ICGC
HRKHLQEIP
DEG_APCC_DBOX_1
0.6126
p.L12Q
TCGA-DU-7007
LGG
TCGA
HRKHLQEIP
DEG_APCC_DBOX_1
0.2778
p.L12Q
DO22400
LGG
ICGC
HRKHLQEIP
DEG_APCC_DBOX_1
0.2778
p.S10G
DO7810
COAD
ICGC
HRKHLQEIP
DEG_APCC_DBOX_1
0.6993
p.N15S
SIDM00537
Colorectal Carcinoma
GDSC
HRKHLQEIP
DEG_APCC_DBOX_1
0.1944
p.N15S
ACH-000982
Colon/Colorectal Cancer
CCLE
HRKHLQEIP
DEG_APCC_DBOX_1
0.1944
p.N15S
ACH-001345
Colon/Colorectal Cancer
CCLE
HRKHLQEIP
DEG_APCC_DBOX_1
0.1944
p.N15S
GP5d
large_intestine
COSMIC
HRKHLQEIP
DEG_APCC_DBOX_1
0.1944
p.L5F
DMS-79
lung
COSMIC
HRKHLQEIP
DEG_APCC_DBOX_1
0.6981
p.A13T
SNU-1040
large_intestine
COSMIC
HRKHLQEIP
DEG_APCC_DBOX_1
0.25
p.A6S
DMS-79
lung
COSMIC
HRKHLQEIP
DEG_APCC_DBOX_1
0.7588
Drug responses associated with SKP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRKHLQEIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13309
S-phase kinase-associated protein 2
DEG_APCC_DBOX_1
2:10
HRKHLQEIP
APC,CDC20,FZR1
0.9859
More...