DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HRQDLAIVE
Uniprot ID:
B2RXH2
Source protein:
Lysine-specific demethylase 4E
Source gene:
KDM4E
Class:
DEG_APCC_DBOX_1
Location:
335:343
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8908
ASA_SCORE:
86.5111
COIL:
0.6507
CONS_SCORE:
0.4202
DSS_SCORE:
0.2683
HELIX:
0.2878
FCONS_SCORE:
1.2811
RIG_SCORE:
0.8244
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E331Q
TCGA-55-A48Y
LUAD
TCGA
HRQDLAIVE
DEG_APCC_DBOX_1
0.2222
p.E331Q
DO26160
LUAD
ICGC
HRQDLAIVE
DEG_APCC_DBOX_1
0.2222
p.L339V
TCGA-A5-A1OH
UCEC
TCGA
HRQDLAIVE
DEG_APCC_DBOX_1
0.6765
p.L339V
DO48180
UCEC
ICGC
HRQDLAIVE
DEG_APCC_DBOX_1
0.6765
p.R348K
TCGA-E6-A1LX
UCEC
TCGA
HRQDLAIVE
DEG_APCC_DBOX_1
0.1944
p.R348K
DO41020
UCEC
ICGC
HRQDLAIVE
DEG_APCC_DBOX_1
0.1944
p.V342L
DO229037
LICA
ICGC
HRQDLAIVE
DEG_APCC_DBOX_1
0.5654
p.E331D
DO229041
LICA
ICGC
HRQDLAIVE
DEG_APCC_DBOX_1
0.2222
p.A340V
ACH-000919
Gastric Cancer
CCLE
HRQDLAIVE
DEG_APCC_DBOX_1
0.5825
Drug responses associated with KDM4E mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HRQDLAIVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
B2RXH2
Lysine-specific demethylase 4E
DEG_APCC_DBOX_1
335:343
HRQDLAIVE
APC,CDC20,FZR1
0.8908
More...