DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPAASTPPGGITV
Uniprot ID:
Q6UXI9
Source protein:
Nephronectin
Source gene:
NPNT
Class:
DEG_ODPH_VHL_1
Location:
357:370
E3 ligase:
VHL
DEGRON score:
0.8206
ASA_SCORE:
58.8286
COIL:
0.665
CONS_SCORE:
0.5498
DSS_SCORE:
0.7238
HELIX:
0.0449
FCONS_SCORE:
0.8641
RIG_SCORE:
0.6482
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P373T
TCGA-B0-4706
KIRC
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.25
p.T349A
TCGA-CG-5728
STAD
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1111
p.P356S
TCGA-EE-A29Q
SKCM
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.3056
p.P356S
TCGA-ER-A3PL
SKCM
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.3056
p.E378K
TCGA-FR-A726
SKCM
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1111
p.P359L
TCGA-FS-A1ZK
SKCM
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.7582
p.R379K
TCGA-RP-A695
SKCM
TCGA
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.0833
p.G353R
DO1285
BRCA
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2222
p.G353R
MEL-JUSO
skin
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2222
p.V374L
DO229045
LICA
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2222
p.Q379H
DO23732
LUAD
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.0833
p.S362T
DO23557
LUAD
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.6005
p.G353E
DO222662
MELA
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2222
p.E348K
DO48665
SKCM
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.0833
p.G367W
DO37961
SKCM
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.6714
p.R349K
DO51270
SKCM
ICGC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1111
p.T366K
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.7306
p.T366K
ACH-000916
Lung Cancer
CCLE
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.7306
p.T366K
NCI-H1573
lung
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.7306
p.K351N
SIDM01519
Head and Neck Carcinoma
GDSC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1667
p.P350A
ACH-001396
Metastasis
CCLE
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1389
p.T353K
NCI-H1573
lung
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2222
p.L364M
RXF393
kidney
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.711
p.L351M
RXF393
kidney
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.1667
p.T355A
NCI-H1792
lung
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2778
p.P365Q
COLO-741
large_intestine
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.5924
p.G370R
MEL-JUSO
skin
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.7568
p.T372A
NCI-H1792
lung
COSMIC
IAPAASTPPGGITV
DEG_ODPH_VHL_1
0.2778
Drug responses associated with NPNT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPAASTPPGGITV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UXI9
Nephronectin
DEG_ODPH_VHL_1
357:370
IAPAASTPPGGITV
VHL
0.8206
More...