DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPAEAPDAKVRM
Uniprot ID:
O00425
Source protein:
Insulin-like growth factor 2 mRNA-binding protein 3
Source gene:
IGF2BP3
Class:
DEG_ODPH_VHL_1
Location:
441:453
E3 ligase:
VHL
DEGRON score:
0.8307
ASA_SCORE:
69.3231
COIL:
0.746
CONS_SCORE:
0.5072
DSS_SCORE:
0.2625
HELIX:
0.0903
FCONS_SCORE:
0.8069
RIG_SCORE:
0.7803
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A442V
TCGA-2W-A8YY
CESC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6936
p.A442V
DO223732
CESC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6936
p.A442G
TCGA-66-2769
LUSC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.754
p.A442G
DO26522
LUSC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.754
p.E461Q
TCGA-98-8021
LUSC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.E461Q
DO27468
LUSC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.A435T
TCGA-AP-A1DK
UCEC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1667
p.A435T
DO42033
UCEC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1667
p.M453L
TCGA-D5-6931
COAD
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.5999
p.M453L
DO8384
COAD
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.5999
p.A444T
TCGA-DF-A2KN
UCEC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6028
p.A444T
DO223282
UCEC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6028
p.E461K
TCGA-MA-AA43
CESC
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.E461K
DO219725
CESC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.E461D
TCGA-UZ-A9PZ
KIRP
TCGA
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.E461D
DO219714
KIRP
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1111
p.V451E
DO228126
EOPC
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.7693
p.A444V
DO233752
GACA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.5825
p.P460T
DO229035
LICA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1389
p.P459Q
DO229041
LICA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1667
p.P459Q
DO222494
MELA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.1667
p.I456M
DO232826
NACA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.25
p.R452M
DO232829
NACA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.7521
p.R452K
DO229453
SKCA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6126
p.V454L
DO229213
THCA
ICGC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.3056
p.I441L
SIDM02033
Colorectal Carcinoma
GDSC
IAPAEAPDAKVRM
DEG_ODPH_VHL_1
0.6063
Drug responses associated with IGF2BP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPAEAPDAKVRM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00425
Insulin-like growth factor 2 mRNA-binding protein 3
DEG_ODPH_VHL_1
441:453
IAPAEAPDAKVRM
VHL
0.8307
More...