DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPGVRVSGDDVII
Uniprot ID:
P30876
Source protein:
DNA-directed RNA polymerase II subunit RPB2
Source gene:
POLR2B
Class:
DEG_ODPH_VHL_1
Location:
854:867
E3 ligase:
VHL
DEGRON score:
0.6171
ASA_SCORE:
39.8
COIL:
0.5631
CONS_SCORE:
0.6122
DSS_SCORE:
0.3354
HELIX:
0.0091
FCONS_SCORE:
1.1333
RIG_SCORE:
0.7639
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D846N
TCGA-60-2703
LUSC
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
TCGA-DA-A1HY
SKCM
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
TCGA-HD-7754
HNSC
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
DO222817
BTCA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
DO15094
HNSC
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
DO27715
LUSC
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D846N
DO37409
SKCM
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.D849N
TCGA-AC-A23H
BRCA
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1944
p.D849N
DO2401
BRCA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1944
p.P874H
TCGA-GN-A26C
SKCM
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1389
p.P874H
DO37782
SKCM
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1389
p.D864N
TCGA-V5-A7RB
ESCA
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.5821
p.L853F
TCGA-ZF-A9R7
BLCA
TCGA
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.3056
p.L853F
DO219064
BLCA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.3056
p.D864Y
DO222762
COCA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.6214
p.D846Y
DO234251
ESAD
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.1111
p.R859C
DO222595
MELA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.719
p.G852V
DO49135
PACA
ICGC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.2778
p.P854S
KYSE-70
oesophagus
COSMIC
IAPGVRVSGDDVII
DEG_ODPH_VHL_1
0.6752
Drug responses associated with POLR2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPGVRVSGDDVII
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30876
DNA-directed RNA polymerase II subunit RPB2
DEG_ODPH_VHL_1
854:867
IAPGVRVSGDDVII
VHL
0.6171
More...