DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPRDSPEWVCF
Uniprot ID:
Q5SYB0
Source protein:
FERM and PDZ domain-containing protein 1
Source gene:
FRMPD1
Class:
DEG_ODPH_VHL_1
Location:
1239:1250
E3 ligase:
VHL
DEGRON score:
0.9914
ASA_SCORE:
78.8333
COIL:
0.7344
CONS_SCORE:
0.4186
DSS_SCORE:
0.5704
HELIX:
0.0285
FCONS_SCORE:
0.8933
RIG_SCORE:
0.6974
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1229K
TCGA-06-5416
GBM
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.0556
p.E1229K
DO10880
GBM
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.0556
p.S1244T
TCGA-55-8301
LUAD
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6005
p.S1244T
DO24682
LUAD
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6005
p.D1238Y
TCGA-59-2348
OV
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.D1238Y
DO29508
OV
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.D1238Y
SIDM00807
Bladder Carcinoma
GDSC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.D1238Y
SIDM01525
Acute Myeloid Leukemia
GDSC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.P1254H
TCGA-A5-A0G1
UCEC
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.2222
p.P1254H
DO42472
UCEC
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.2222
p.P1254H
ACH-001063
Ovarian Cancer
CCLE
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.2222
p.E1229Q
TCGA-CN-A6V1
HNSC
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.0556
p.E1229Q
DO52048
HNSC
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.0556
p.R1242S
TCGA-E6-A1M0
UCEC
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6316
p.R1242S
DO43682
UCEC
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6316
p.D1238H
TCGA-GS-A9TZ
DLBC
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.D1238H
DO219918
DLBC
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.3056
p.D1243Y
TCGA-ND-A4W6
UCS
TCGA
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6214
p.V1248A
DO233146
GACA
ICGC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.6936
p.D1243E
SIDM00377
Other Sarcomas
GDSC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.5647
p.D1243E
ACH-001655
Endometrial/Uterine Cancer
CCLE
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.5647
p.D1243E
SKN
soft_tissue
COSMIC
IAPRDSPEWVCF
DEG_ODPH_VHL_1
0.5647
Drug responses associated with FRMPD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPRDSPEWVCF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SYB0
FERM and PDZ domain-containing protein 1
DEG_ODPH_VHL_1
1239:1250
IAPRDSPEWVCF
VHL
0.9914
More...