DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPSFLASEKVDF
Uniprot ID:
Q8IZX4
Source protein:
Transcription initiation factor TFIID subunit 1-like
Source gene:
TAF1L
Class:
DEG_ODPH_VHL_1
Location:
190:202
E3 ligase:
VHL
DEGRON score:
0.7098
ASA_SCORE:
76.9615
COIL:
0.7015
CONS_SCORE:
0.2368
DSS_SCORE:
0.3547
HELIX:
0.252
FCONS_SCORE:
0.9554
RIG_SCORE:
0.7677
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A191G
TCGA-21-5784
LUSC
TCGA
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.754
p.A191G
DO27271
LUSC
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.754
p.V200G
TCGA-55-8204
LUAD
TCGA
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.7532
p.V200G
DO45322
LUAD
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.7532
p.L195F
TCGA-BP-5199
KIRC
TCGA
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.587
p.L195F
DO19813
KIRC
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.587
p.S193F
TCGA-FS-A1ZZ
SKCM
TCGA
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.6871
p.S193F
DO37412
SKCM
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.6871
p.D183Y
TCGA-L9-A444
LUAD
TCGA
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.1389
p.D183Y
DO26015
LUAD
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.1389
p.S204N
DO234389
ESAD
ICGC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.2778
p.S203N
SIDM01006
Plasma Cell Myeloma
GDSC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.3056
p.S203N
ACH-000193
Myeloma
CCLE
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.3056
p.S203N
KARPAS-620
haematopoietic_and_lymphoid_tissue
COSMIC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.3056
p.P187T
SIDM01156
Small Cell Lung Carcinoma
GDSC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.25
p.P187T
ACH-000890
Lung Cancer
CCLE
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.25
p.P187T
SW1271
lung
COSMIC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.25
p.S193Y
SIDM00122
Breast Carcinoma
GDSC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.6009
p.S193Y
ACH-000288
Breast Cancer
CCLE
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.6009
p.S193Y
BT-549
breast
COSMIC
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.6009
p.L186F
ACH-000695
Lung Cancer
CCLE
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.2222
p.I189V
ACH-000923
Lymphoma
CCLE
IAPSFLASEKVDF
DEG_ODPH_VHL_1
0.3056
Drug responses associated with TAF1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPSFLASEKVDF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZX4
Transcription initiation factor TFIID subunit 1-like
DEG_ODPH_VHL_1
190:202
IAPSFLASEKVDF
VHL
0.7098
More...