DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPSPQRSRSFSV
Uniprot ID:
Q9NZJ5
Source protein:
Eukaryotic translation initiation factor 2-alpha kinase 3
Source gene:
EIF2AK3
Class:
DEG_ODPH_VHL_1
Location:
712:724
E3 ligase:
VHL
DEGRON score:
0.9979
ASA_SCORE:
62.2462
COIL:
0.7042
CONS_SCORE:
0.2483
DSS_SCORE:
0.5137
HELIX:
0.0928
FCONS_SCORE:
1.0283
RIG_SCORE:
0.6902
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P716L
TCGA-D3-A8GM
SKCM
TCGA
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6471
p.P716L
SIDM00209
Glioblastoma
GDSC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6471
p.P716L
D-423MG
central_nervous_system
COSMIC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6471
p.T705K
TCGA-D7-6528
STAD
TCGA
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.5833
p.P714T
TCGA-GD-A76B
BLCA
TCGA
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.7031
p.P714T
DO51886
BLCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.7031
p.A713S
TCGA-IB-7651
PAAD
TCGA
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.7588
p.A713S
DO46657
PAAD
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.7588
p.I709T
TCGA-RD-A8N6
STAD
TCGA
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.25
p.I709T
DO50140
STAD
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.25
p.T710N
DO10236
COAD
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.2778
p.A704S
DO227709
COCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO229010
COCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO229013
COCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO229016
COCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO229003
COCA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO229489
LAML
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO228947
LICA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO230999
LUSC
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO231075
LUSC
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.A704S
DO231007
LUSC
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.S719R
DO228971
LICA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.7427
p.P714S
DO222843
MELA
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6752
p.K730Q
DO41584
UCEC
ICGC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1667
p.R718T
SIDM00339
Non-Small Cell Lung Carcinoma
GDSC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6765
p.R718T
ACH-000787
Lung Cancer
CCLE
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6765
p.R718T
LXF-289
lung
COSMIC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6765
p.S732N
SIDM00479
Esophageal Carcinoma
GDSC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.S732N
ACH-000679
Esophageal Cancer
CCLE
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.S732N
OE19
oesophagus
COSMIC
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.1111
p.R720S
ACH-002044
Head and Neck Cancer
CCLE
IAPSPQRSRSFSV
DEG_ODPH_VHL_1
0.6316
Drug responses associated with EIF2AK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00951
LAML|acute_myeloid_leukaemia
p.E994A (No)
GDSC
GSK2606414
22.287
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.A1068V (No)
GDSC
GSK2606414
8.4809
SIDM00683
PRAD|prostate
p.M1053V (No)
GDSC
GSK2606414
29.723
SIDM00901
UCEC|endometrium
p.Y1019C (No)
GDSC
GSK2606414
7.2928
SIDM00849
KIRC|kidney
p.A422T (No)
GDSC
GSK2606414
39.591
SIDM00264
UNCLASSIFIED|ewings_sarcoma
p.D307E (No)
GDSC
GSK2606414
283.2
SIDM01093
CESC|cervix
p.I310L (No)
GDSC
GSK2606414
49.106
SIDM01190
BLCA|bladder
p.R240H (No)
GDSC
GSK2606414
105.86
SIDM00980
STAD|stomach
p.I906V (No)
GDSC
GSK2606414
23.581
SIDM00499
PRAD|prostate
p.R911fs*20 (No)
GDSC
GSK2606414
28.045
SIDM00429
UNCLASSIFIED|B_cell_leukemia
p.N582fs*11 (No)
GDSC
GSK2606414
8.4809
SIDM00490
GBM|glioma
p.M975fs*30 (No)
GDSC
GSK2606414
84.494
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.E86fs*18 (No)
GDSC
GSK2606414
9.3974
SIDM01045
UCEC|endometrium
p.L181H (No)
GDSC
GSK2606414
51.389
SIDM00217
COREAD|large_intestine
p.Q887* (No)
GDSC
GSK2606414
29.356
SIDM00217
COREAD|large_intestine
p.V568A (No)
GDSC
GSK2606414
29.356
SIDM00839
COREAD|large_intestine
p.G327* (No)
GDSC
GSK2606414
22.919
SIDM00758
LUAD|lung_NSCLC_adenocarcinoma
p.R240H (No)
GDSC
GSK2606414
109.12
SIDM00282
COREAD|large_intestine
p.A342V (No)
GDSC
GSK2606414
24.257
SIDM00479
ESCA|oesophagus
p.S732N (Yes)
GDSC
GSK2606414
246.58
SIDM00479
ESCA|oesophagus
p.N478H (No)
GDSC
GSK2606414
246.58
SIDM00150
COREAD|large_intestine
p.D691N (No)
GDSC
GSK2606414
2.3859
SIDM00660
COREAD|large_intestine
p.S1022N (No)
GDSC
GSK2606414
78.225
SIDM00660
COREAD|large_intestine
p.P1020Q (No)
GDSC
GSK2606414
78.225
SIDM00760
SCLC|lung_small_cell_carcinoma
p.Q667K (No)
GDSC
GSK2606414
61.874
SIDM00267
UNCLASSIFIED|biliary_tract
p.E372K (No)
GDSC
GSK2606414
38.03
SIDM00753
LUAD|lung_NSCLC_adenocarcinoma
p.E820* (No)
GDSC
GSK2606414
65.9
SIDM00427
UNCLASSIFIED|rhabdomyosarcoma
p.M390L (No)
GDSC
GSK2606414
16.95
SIDM00863
UNCLASSIFIED|Burkitt_lymphoma
p.V132M (No)
GDSC
GSK2606414
11.272
SIDM00282
COREAD|large_intestine
p.K635fs*2 (No)
GDSC
GSK2606414
24.257
SIDM01169
OV|ovary
p.A116D (No)
GDSC
GSK2606414
17.01
SIDM01044
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.I917N (No)
GDSC
GSK2606414
46.941
SIDM00541
COREAD|large_intestine
p.T428A (No)
GDSC
GSK2606414
11.348
SIDM00541
COREAD|large_intestine
p.R240H (No)
GDSC
GSK2606414
11.348
SIDM01064
UNCLASSIFIED|Hodgkin_lymphoma
p.R240H (No)
GDSC
GSK2606414
13.986
SIDM00119
LUAD|lung_NSCLC_adenocarcinoma
p.A342D (No)
GDSC
GSK2606414
51.837
SIDM01108
LUAD|lung_NSCLC_adenocarcinoma
p.Y186H (No)
GDSC
GSK2606414
201.94
SIDM00339
LUAD|lung_NSCLC_adenocarcinoma
p.R718T (Yes)
GDSC
GSK2606414
16.682
SIDM00921
LUAD|lung_NSCLC_adenocarcinoma
p.L827S (No)
GDSC
GSK2606414
31.732
SIDM00419
UNCLASSIFIED|ewings_sarcoma
p.A468S (No)
GDSC
GSK2606414
8.3449
SIDM01259
ALL|lymphoblastic_leukemia
p.E967G (No)
GDSC
GSK2606414
13.117
SIDM00537
COREAD|large_intestine
p.D777E (No)
GDSC
GSK2606414
30.835
SIDM00384
DLBC|B_cell_lymphoma
p.D357N (No)
GDSC
GSK2606414
15.776
SIDM00054
PAAD|pancreas
p.Q558E (No)
GDSC
GSK2606414
59.394
SIDM00364
ALL|lymphoblastic_leukemia
p.R911fs*20 (No)
GDSC
GSK2606414
8.3465
SIDM00113
KIRC|kidney
p.F335V (No)
GDSC
GSK2606414
236.81
SIDM00878
BRCA|breast
p.M1053V (No)
GDSC
GSK2606414
44.466
SIDM00971
BRCA|breast
p.D366delD (No)
GDSC
GSK2606414
61.802
SIDM01010
UNCLASSIFIED|anaplastic_large_cell_lymphoma
p.E1050K (No)
GDSC
GSK2606414
15.227
SIDM00118
COREAD|large_intestine
p.E809* (No)
GDSC
GSK2606414
54.103
All proteins holding degron of IAPSPQRSRSFSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZJ5
Eukaryotic translation initiation factor 2-alpha kinase 3
DEG_ODPH_VHL_1
712:724
IAPSPQRSRSFSV
VHL
0.9979
More...