DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPSRGMRIGVQI
Uniprot ID:
P08F94
Source protein:
Fibrocystin
Source gene:
PKHD1
Class:
DEG_ODPH_VHL_1
Location:
461:473
E3 ligase:
VHL
DEGRON score:
0.6104
ASA_SCORE:
40.1154
COIL:
0.3389
CONS_SCORE:
0.4652
DSS_SCORE:
0.242
HELIX:
0.0099
FCONS_SCORE:
1.2635
RIG_SCORE:
0.7459
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G466W
TCGA-86-A456
LUAD
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.6714
p.G466W
DO24890
LUAD
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.6714
p.A462T
TCGA-95-7562
LUAD
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.7139
p.A462T
DO51196
LUAD
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.7139
p.P480T
TCGA-CN-6019
HNSC
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.1389
p.P480T
DO14316
HNSC
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.1389
p.V482A
TCGA-DF-A2KU
UCEC
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.0833
p.V482A
DO223286
UCEC
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.0833
p.H459Y
TCGA-EB-A6R0
SKCM
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2778
p.H459Y
TCGA-EE-A2GM
SKCM
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2778
p.H459Y
DO37555
SKCM
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2778
p.H459Y
DO48646
SKCM
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2778
p.Y452N
TCGA-LG-A6GG
LIHC
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.5278
p.Y452N
DO49699
LIHC
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.5278
p.L478M
TCGA-QQ-A5VC
SARC
TCGA
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.1944
p.L478M
DO220250
SARC
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.1944
p.Y453C
DO228190
LICA
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.1111
p.Y452C
DO231934
LICA
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.5278
p.A462D
DO229018
LICA
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.7793
p.H474Y
DO222638
MELA
ICGC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.3056
p.E457D
SIDM01027
Esophageal Squamous Cell Carcinoma
GDSC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2222
p.E457D
KYSE-450
oesophagus
COSMIC
IAPSRGMRIGVQI
DEG_ODPH_VHL_1
0.2222
Drug responses associated with PKHD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPSRGMRIGVQI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08F94
Fibrocystin
DEG_ODPH_VHL_1
461:473
IAPSRGMRIGVQI
VHL
0.6104
More...